DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and tub-1

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_495710.1 Gene:tub-1 / 174312 WormBaseID:WBGene00006655 Length:426 Species:Caenorhabditis elegans


Alignment Length:524 Identity:115/524 - (21%)
Similarity:184/524 - (35%) Gaps:179/524 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   983 NKRLILVDKKRNRRKRQQQEDARRHKLQQTGKSKSLDSCDLLSLQTKLSSKEHEQVVRKLQ-EIS 1046
            |.:.|.::.:|.|:..:.::..:||  |..|..::..:.  :|:.   |.|::......|. .||
 Worm     5 NSQWIEMNLQRQRKMLEDKQKQKRH--QSAGSVRTTSTA--MSMN---SMKDYPTFDNSLPFSIS 62

  Fly  1047 DSSACSSAANTLCFKCRNNMSPSSACKRCQPSASSVLDEITAVVPAVEPAKESPAVQAKP--APK 1109
            |:|:.|.:.|                              |.::|..:|..: |.:|:.|  .|:
 Worm    63 DNSSVSVSMN------------------------------TPLIPTQDPIAQ-PRMQSMPRQQPQ 96

  Fly  1110 KRFDVITSFTDSPLFTRKHRFGIGRSKETAGTENSTPLLGRKQDNGFSFVKQLSEVRW------- 1167
            :..:.:.|..|.|                              ||..:  .:||:|..       
 Worm    97 QVQESLISIGDYP------------------------------DNDIN--AKLSKVNLTSCVVSD 129

  Fly  1168 ---RRKEQPAQAQVNGSSNASTLERQPQPE---ITGAACGTVEATPVE---AKASVSLHTQALT- 1222
               ..|...|.:..|....|..:..:..|:   |.......||...||   .|.|::.....:. 
 Worm   130 DEDEDKRSYADSPWNTDVVADRIPSEVLPDYNFIKNNLAKFVEDPAVEHCLYKCSITRQKSGVDK 194

  Fly  1223 -TLENIISRLRDLDEGRLTPPSTPQRLPRSSPASPAASKKNKRQQSNSPIRHILNSPLLNRRQRK 1286
             ........|.:.|                         .:|||:..          ||..|:||
 Worm   195 GMFPTYFLHLEEFD-------------------------TDKRQKIF----------LLAARKRK 224

  Fly  1287 KQ---SIIESSDDEGNQTNGSGEESNNAGN--GKQY-------RDLETFQKAQLRQKLK------ 1333
            |.   :.:.|:|.......|.|..:....|  |.|:       ...:|...|.:||:|.      
 Worm   225 KSTTANYLLSTDPTNLSREGEGYCAKVRSNALGTQFTVYDSGQNPKKTTNHAAIRQELAAVIYET 289

  Fly  1334 -----RGK---------IEPNGSASCANPAPVR---------REF---------VMHNKAPMWNE 1366
                 :|.         |||......|...|||         ..:         ::.||:|.||:
 Worm   290 NVLGFKGPRKMTIVMPGIEPPTENRPAVRCPVRPIQDKHTLLERYRLNDLDSLKILSNKSPQWND 354

  Fly  1367 MSQVYQLDFGGRVTQESAKNFQIEFRGKQ---VMQFGRIDGNAYTLDFQYPFSALQAFAVALANV 1428
            .:|.|.|:|.|||||.|.|||||..:...   |||||||..:.:|:||:||.||:|||.:|:.:.
 Worm   355 ETQSYVLNFHGRVTQASVKNFQIIHQSSPEYIVMQFGRISDDEFTMDFRYPLSAVQAFGIAMTSF 419

  Fly  1429 TQRL 1432
            ..:|
 Worm   420 HGKL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506 38/82 (46%)
tub-1NP_495710.1 Tub 174..419 CDD:279506 73/279 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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