DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and tub-2

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_490913.2 Gene:tub-2 / 171758 WormBaseID:WBGene00022139 Length:869 Species:Caenorhabditis elegans


Alignment Length:1451 Identity:341/1451 - (23%)
Similarity:497/1451 - (34%) Gaps:631/1451 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TILSLSWMGKVPDDIPEDEGWKLNRTNYYQEGWLATGNVRGIVGVTFTTSHCRKNMDYPLRTNYN 80
            ||..|||:.:  .|.|:             .|.|..|...|.||||.|  ..:...|...|.|:|
 Worm    17 TITHLSWIQQ--QDKPD-------------HGLLGVGTETGSVGVTLT--DFKPTPDDLTRYNFN 64

  Fly    81 LRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWSIELINDRNTPVTHFSWSHDGRMALI 145
            ||||.:.:.:|.||:...||||||:||||:||::.:.|||:||:|||...|:..|||..|..|||
 Worm    65 LRGHHNAIRMVTWNKSQSKLASCDASGIIYVWVRNDDRWSVELVNDRGVKVSDLSWSPCGGSALI 129

  Fly   146 CYQDGFVLVGSVAGQRYWSSMLNLESTITCGIWTPDDQQVYFGTTQGQVIVMDVHGAMVSQVQLS 210
            ||.|.|||:||..|||.||:...|.:.:|||:|.||.:|:..|.:.|.:.|:...|..::....:
 Worm   130 CYDDNFVLIGSANGQRVWSNSFPLPAAVTCGVWAPDSRQLVLGFSTGTIQVLSNAGVNITSRSFT 194

  Fly   211 NDVPITSMAWSCEKFKMEEGEEAEPGVTNAAKRSFVLAVSFQNGYIYLLKSFDDVSPAHINTCLN 275
            .| .:|.||:|..:.|:.|.|             :.||:......||::.::|.:.||...:...
 Worm   195 ED-KLTQMAFSPLRTKVREVE-------------WTLAMLSSANKIYMISAYDQLHPAIYRSKFQ 245

  Fly   276 GALGMVMEWSNSRELLAVAGTLRTGVDGTKTEDMGTPSCYTNLVKFYTETGTC--LYQAHIPCS- 337
               .:.|||:....:||:.                  :....||...|   ||  :::..||.: 
 Worm   246 ---VIRMEWNTDGTILALI------------------NANNELVMIDT---TCRVIHRERIPIAD 286

  Fly   338 -----------SATVSAITWGHNDKRLFIATGTQVHIAWVSRRVASLQLLCRLEIQASVG-SESL 390
                       :..::|.||.||...:.||.|..:.:..:...|.||..:...::...:| |...
 Worm   287 KEKTLIPNPPPTQKLTAFTWAHNGNVVIIAAGGCLTVGRILFGVPSLFEIVTYDLWKMMGCSSKK 351

  Fly   391 LPLLPLPSRIKSLIGNLFAQTIRCCVPDLKSLRDFVSRPPLCS---TRLHCTMIRHDDDSNLSSG 452
            :..||:|.:..:.:..|....|||.:|..:.:..:|     ||   .|.:||:      ..|:.|
 Worm   352 VDKLPIPLKEMNALRELDHHVIRCRIPRSQDMCSYV-----CSVVDARCYCTI------RPLARG 405

  Fly   453 T-CYTLYLEYLGGLVPLLKGKRTSKIRPEFVIFDPQVNDSPLYFQYSAEAKSSSGSSQSTTTGNS 516
            : .|.|..|:||||||||.|::.::..|:|.|           |.|.::..:||..|     |:|
 Worm   406 SHTYVLCFEHLGGLVPLLLGRQVNRFLPQFQI-----------FMYQSKPPTSSPPS-----GSS 454

  Fly   517 GRTDSSDSDFEERSRFGSPRTP---RKKR---------VRPKRRHQAGDRLSASGGGVSNDPDSL 569
            .:.:..:|.|    |:.:.|..   |.||         |||.|                  ||: 
 Worm   455 AQVEDVNSIF----RYSTGRNSLWRRSKRQIRALMSRHVRPTR------------------PDT- 496

  Fly   570 DELAYVDTLPEQEVKLVEVTSNIWGTKFKIHGLAKT-VPANLGQVTYKTSLLHLQPRQMTLVITE 633
                          :|::||||:|.|:|.|..|:.: :|..||||.||||:|||||||||:.:..
 Worm   497 --------------RLLQVTSNVWCTRFNISSLSPSLLPTFLGQVIYKTSVLHLQPRQMTIDLAV 547

  Fly   634 LRDDFPPGPDPSFNPNIFSEDEDEHHQHQGIHHDAVPQVNVITAQDGASLKPPIIPQRRLTDGAS 698
            |                                                       ||:  ||..
 Worm   548 L-------------------------------------------------------QRK--DGKE 555

  Fly   699 APLIAPMSPRPNRILARHKNSLTVNGERGSGSSAGLSPLARAESYDDDSSNESQEAGAAGSQSTT 763
            .|                                                    ||...|:...|
 Worm   556 LP----------------------------------------------------EASVDGTTHMT 568

  Fly   764 VLLHQAPSNGSGPGPSCSKSITRPKTISSFKNSYSRSSSNSSCQSRHAISPLYCDGAVPTLQSPK 828
                .:|..|                ::|.:..:.:... :.|.|..|:                
 Worm   569 ----SSPDQG----------------LTSEERQFFQKIL-AECLSLRAV---------------- 596

  Fly   829 NAVAPSDIIFERPAVPAAGQTTLMSYSSNADYANNVVQVKNALMSEPVRSANSHVNPVPLNLNLN 893
              :..|:  |.:|..|||..|                                            
 Worm   597 --INSSN--FGKPPPPAAAST-------------------------------------------- 613

  Fly   894 LERMDARVKCTAPTTSSTAKRREMLYIDEETQSPTPTPSSSSMKRTPTVVSIAPALPDSITRSCS 958
                     .:.|...||:|        |...|...||.|     |.||.|     ...:|...|
 Worm   614 ---------ISLPCQPSTSK--------EPDSSAHTTPIS-----TRTVES-----KHDVTSMAS 651

  Fly   959 VGYLDSVAITPSD-EALSALRKDAPNKRLILVDKKRNRRKRQQQEDARRHKLQQTGKSKSLDSCD 1022
                 ||:....: |||:.:..||..|.::                                   
 Worm   652 -----SVSTWHEEIEALAFIDGDADEKAML----------------------------------- 676

  Fly  1023 LLSLQTKLSSKEHEQVVRKLQEISDSSACSSAANTLCFKCRNNMSPSSACKRCQPSASSVLDEIT 1087
                                                                             
 Worm   677 ----------------------------------------------------------------- 676

  Fly  1088 AVVPAVEPAKESPAVQAKPAPKKRFDVITSFTDSPLFTRKHRFGIGRSKETAGTENSTPLLGRKQ 1152
                 |:||.::.....:.|.||..:||.|..|...                             
 Worm   677 -----VQPALKTGWAAMEQASKKDAEVIRSHVDKLA----------------------------- 707

  Fly  1153 DNGFSFVKQLSEVRWRRKEQPAQAQVNGSSNASTLERQPQPEITGAACGTVEATPVEAKASVSLH 1217
                |..:|||             :.:|..|..                       ..|||::..
 Worm   708 ----SIAEQLS-------------KRHGDFNVK-----------------------RDKASINKM 732

  Fly  1218 TQALTTLENIISRLRDLDEGRLTPPSTPQRLPRSSPASPAASKKNKRQQSNSPIRHILNSPLLNR 1282
            ...:.||   :.|:.::::                        |.......:.:|.:||:  || 
 Worm   733 RSQMKTL---LRRVNEIEQ------------------------KVANGDVKTEVRQLLNT--LN- 767

  Fly  1283 RQRKKQSIIESSDDEGNQTNGSGEESNNAGNGKQYRDLETFQKAQLRQKLKRGKIEPNGSASCAN 1347
              ..|:::.|.....|...|.:                              .|||         
 Worm   768 --EMKKALGEGVPKSGRSLNST------------------------------CKIE--------- 791

  Fly  1348 PAPVRREFVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQIEFRGKQVMQFGRIDGNAYTLDFQ 1412
                    .|.||.|.|||.:||||||||||||||||||||||...|||:|||||:|.:|||||:
 Worm   792 --------TMTNKTPFWNEQNQVYQLDFGGRVTQESAKNFQIELDSKQVLQFGRIEGGSYTLDFR 848

  Fly  1413 YPFSALQAFAVALANVTQRLK 1433
            |||||.||||||||::|||||
 Worm   849 YPFSAAQAFAVALASITQRLK 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201 91/243 (37%)
WD40 81..359 CDD:295369 94/291 (32%)
WD40 repeat 91..126 CDD:293791 20/34 (59%)
WD40 repeat 132..168 CDD:293791 20/35 (57%)
WD40 repeat 173..208 CDD:293791 11/34 (32%)
WD40 repeat 216..263 CDD:293791 11/46 (24%)
WD40 repeat 270..333 CDD:293791 10/64 (16%)
Tub <588..>644 CDD:279506 28/56 (50%)
Tub <1355..1426 CDD:279506 54/70 (77%)
tub-2NP_490913.2 WD40 65..>316 CDD:225201 92/288 (32%)
WD40 repeat 73..110 CDD:293791 20/36 (56%)
WD40 repeat 115..154 CDD:293791 21/38 (55%)
WD40 repeat 158..203 CDD:293791 14/45 (31%)
WD40 repeat 210..245 CDD:293791 9/47 (19%)
WD40 repeat 246..272 CDD:293791 7/43 (16%)
Cytochrom_B562 680..771 CDD:382596 26/191 (14%)
Tub <795..852 CDD:366500 44/56 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167737
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2041
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 388 1.000 Inparanoid score I1148
Isobase 1 0.950 - 0 Normalized mean entropy S6908
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 1 1.000 - - FOG0006168
OrthoInspector 1 1.000 - - oto20256
orthoMCL 1 0.900 - - OOG6_108297
Panther 1 1.100 - - LDO PTHR16517
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4245
SonicParanoid 1 1.000 - - X4453
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.740

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