DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and LOC110439885

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_021333037.1 Gene:LOC110439885 / 110439885 -ID:- Length:214 Species:Danio rerio


Alignment Length:74 Identity:40/74 - (54%)
Similarity:53/74 - (71%) Gaps:3/74 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1357 MHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQIEFRGKQ---VMQFGRIDGNAYTLDFQYPFSAL 1418
            :.||.|:|||.:..:.|:|.|||||.|.|||||.....|   |||||||..:|:|||::||..|:
Zfish   133 LRNKTPVWNEETASHVLNFNGRVTQASIKNFQIVHNKDQDYIVMQFGRIADDAFTLDYRYPLCAV 197

  Fly  1419 QAFAVALAN 1427
            ||||:||::
Zfish   198 QAFAIALSS 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506 39/71 (55%)
LOC110439885XP_021333037.1 Tub 6..207 CDD:307359 40/74 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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