DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and tulp2

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_017951001.1 Gene:tulp2 / 100496326 XenbaseID:XB-GENE-991735 Length:546 Species:Xenopus tropicalis


Alignment Length:567 Identity:136/567 - (23%)
Similarity:214/567 - (37%) Gaps:154/567 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   983 NKRLILVDKKRNRRKR----QQQEDARRHKLQQTGKSKS----LDSCDLLSL----QTKLSSKEH 1035
            ::|.:..:|:|.:|:.    |...|. :.|.::|.|::.    :|||.:.|:    .....|:||
 Frog    14 HQRNLFQEKQRRKREEPLMFQANPDV-KGKPRRTRKTEDQAPLVDSCSVSSIYMGANNPSMSEEH 77

  Fly  1036 ---EQVVRKLQEISDSS-------ACSSAANTLC--FKCRNNMSPSSACKRCQPSASSV----LD 1084
               .....|.:..|::|       :|.....|:.  .|..||.......:|.|.:.:..    |.
 Frog    78 SGSSPTGLKAEPDSNTSNADEQDYSCEDIEETILEDTKPLNNKGHLVTARRRQKTKAKTGKWDLK 142

  Fly  1085 E--ITAVVPAVEPAKESPAVQAKPAPK------KRFDVITSFTD-------SPLFTRKHRFGIGR 1134
            |  ..|...:.:.:|:|.:..||.|.|      |.||.:.:|.|       :..|..:|....|.
 Frog   143 ESKTKAQTASCKSSKKSKSPPAKDAEKENTPQEKGFDDVAAFHDELQEMHTNTSFPVQHSSEEGE 207

  Fly  1135 SKETAGTENSTPLLGRKQDN------GFSFVKQLSEVRWRRKEQPAQA----QVNGSSN------ 1183
            |..|.|.....|...::::.      |.|..|..|.     ||:.|||    ..:|.|:      
 Frog   208 SSFTVGDRKIPPAPVKRRNKKKTTKPGHSRTKCHSS-----KERVAQATEEDDFDGESDILSSVV 267

  Fly  1184 ----ASTLERQPQPEITGAACGTVEATPVEA----KASVSLHTQALTTLENIISRLRDLDEGRLT 1240
                .||..|:....:..|    :|...:|.    .|..::..|...|.:.     :.:|:|  .
 Frog   268 YTRPVSTSSREEDTHLAAA----IEIDDLEGFALRPAPNNMIFQCRITRDK-----KGVDKG--I 321

  Fly  1241 PPSTPQRLPRSSPAS---PAASKKNKRQQSNSPIRHILNSPLLNRRQRKKQSIIESSD--DEGNQ 1300
            .|:....|.|.....   .|..|:.|.:.||..|.                  ::.:|  .:|:.
 Frog   322 YPTYYLHLERDDGKRLFLMAGRKRKKCKTSNYLIS------------------VDPTDLSRDGDS 368

  Fly  1301 TNGSGEESNNAG-------NGKQYRDLETF--QKAQLRQKL------------------------ 1332
            ..|. ..||..|       ||.. .|.:.|  ::..|||:|                        
 Frog   369 FIGK-VRSNMLGTKFTVFDNGVN-PDTKPFVQERESLRQELVSICYETNVLGFRGPRKMTVIIPS 431

  Fly  1333 -----KRGKIEPNGS----ASCANPAPVRREFVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQ 1388
                 :|..|.|...    .|......:.....:.||||.|||.:|.:.|:|.|||||.|.||||
 Frog   432 MNMEGERVSIRPRNEHETLLSRFQTGNMENIIALQNKAPSWNEETQSFVLNFHGRVTQASVKNFQ 496

  Fly  1389 I---EFRGKQVMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432
            |   |.....:|||||:..:.:|:|||||..|||||::.|::...:|
 Frog   497 IISPEDPEYIIMQFGRVAEDVFTMDFQYPLCALQAFSICLSSFDSKL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506 38/73 (52%)
tulp2XP_017951001.1 Tub_N 14..286 CDD:374488 61/277 (22%)
Tub 298..541 CDD:366500 71/269 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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