DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and tulp3

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001116953.1 Gene:tulp3 / 100144732 XenbaseID:XB-GENE-979585 Length:509 Species:Xenopus tropicalis


Alignment Length:574 Identity:134/574 - (23%)
Similarity:205/574 - (35%) Gaps:195/574 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   971 DEALSALRKDAPNKRLILVDKKRNRRKR----QQQEDARRHK-----------LQQTGKSKSLDS 1020
            ||:.........|:|.:|..|:|.:|:.    |...|.|:.:           |.|:.|.||: :
 Frog    16 DESARLRHLKLENQRTLLEQKQRKKRQEILMVQSNRDTRQRRPKSGKCEEQAPLVQSQKQKSV-N 79

  Fly  1021 CDLL-----SLQTKLSSKEHEQVVRKLQEISDSSACSSA---ANTLCFKC-RNNMSPSSACKRCQ 1076
            |:::     .....|.|..|| :..|:|.::...:|:..   ..|....| ....||.::.:|..
 Frog    80 CNVILNGIDGPAAFLDSGFHE-LDSKIQVLTVGESCTDTDFNVGTGWPSCNEGRASPCNSERRGT 143

  Fly  1077 PSASSVLDEITAVVPAVEPAKESPAVQAKPAPKKRFDVITSFTDSPLFTRKHRFGIGRS--KETA 1139
            |    |.||...                                .||.:      ||||  ::|.
 Frog   144 P----VSDEENT--------------------------------QPLNS------IGRSNLEKTQ 166

  Fly  1140 GTENSTPLLGRKQDNGFSFVKQLSEVRWRRKEQPAQAQVNG---------SSNASTLERQPQPEI 1195
            ...|...:| ||.|.....:::|.:.|...........::.         :.||||.......:.
 Frog   167 QNSNRQEIL-RKPDVSKRDLQELLQERGISDSLNFDEDISDDDDGDDDDEACNASTRPASASSKK 230

  Fly  1196 TGAACGTVEATPVEAKASVSLHTQALTTLENIISRLRDLDEGRLTPPSTPQRLPRSSPASPAASK 1260
            :....||.||.|.:....              |..:.||.|..|.|      .||........|:
 Frog   231 SLTETGTAEAVPPDPSGD--------------IGEIGDLKEFALRP------APRGVVIKTRISR 275

  Fly  1261 KNK-------------RQQSNSPIRHILNSPLLNRRQRKKQSI------IESSD---DEGN---- 1299
            ..|             .::.|:  |.:.   ||..|:||:...      |:.:|   :.||    
 Frog   276 DKKGMDRGLYPTYYMHLERDNN--RKVF---LLAGRKRKRSKTSNYLISIDPTDLSREGGNFIGK 335

  Fly  1300 -QTNGSGEESNNAGNGKQYRDLETFQKAQ-------LRQKL------------------------ 1332
             ::|..|.:.....||      |:..|.|       .||::                        
 Frog   336 LRSNLMGTKFTIYDNG------ESPAKVQGHMSNPTTRQEMAAVCYETNVLGFKGPRKMTVLIPG 394

  Fly  1333 -----KRGKIEP-NGSAS--------CANPAPVRREFV--MHNKAPMWNEMSQVYQLDFGGRVTQ 1381
                 :|...:| |.|.|        |       :|.:  :|||||:||:.:|.|.|:|.||||.
 Frog   395 MNLNHERIPFQPQNDSESLLSRWGNKC-------QENIIELHNKAPVWNDDTQSYVLNFHGRVTH 452

  Fly  1382 ESAKNFQIEFRGKQ---VMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432
            .|.|||||......   ||||||:..:.:|||:.||..|||||:|||::...:|
 Frog   453 ASVKNFQIVHDNDPDYIVMQFGRVAEDFFTLDYSYPLCALQAFSVALSSFDSKL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506 39/75 (52%)
tulp3NP_001116953.1 Tub_N 28..245 CDD:292938 54/261 (21%)
Tub 262..502 CDD:279506 72/263 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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