DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tusp and Gm2808

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_017173259.1 Gene:Gm2808 / 100040500 MGIID:3780977 Length:1062 Species:Mus musculus


Alignment Length:1165 Identity:300/1165 - (25%)
Similarity:415/1165 - (35%) Gaps:363/1165 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 STTTGNSGRTDSSDSDFEE-----------RSRFGSPRTPR---KKRVRPKRRHQAGD-----RL 555
            ||...:...:||||.:..:           ||. .||:.||   :.|..||....|.:     ||
Mouse    20 STVIDSCNCSDSSDIELSDDWAAKKSPKISRSS-KSPKLPRISIEARKSPKLPRAAQEISRSPRL 83

  Fly   556 SASGGGVSNDPDSLDELAYVDTLPEQEVKLVEVTSNIWGTKFKIHGLAKTVPANLGQVTYKTSLL 620
            ......:.:...:..|:.:.|.  .|...|.:||||||||||||.|||..:|.|||.|.||||||
Mouse    84 PMRKPSMGSPSLTRREVPFEDI--TQHNYLAQVTSNIWGTKFKIVGLAAFLPTNLGAVIYKTSLL 146

  Fly   621 HLQPRQMTLVITELRD---DFPPGPDPSFNPNIFSEDEDEHHQHQGIHHDAVPQVNVITAQDGA- 681
            ||||.|||:.:.|:|.   |:.  ..|.||||:||||||:           :|    :|...|. 
Mouse   147 HLQPWQMTIYLPEVRKISMDYI--NLPVFNPNVFSEDEDD-----------LP----VTGASGVP 194

  Fly   682 SLKPPI---IPQRRLTDGASAPLIAPMSPRPNRILARHKNSLTVNGERGSGSSAGL--SPLARAE 741
            ...||.   ||...:...|.|     :||.                     .|.||  |.||...
Mouse   195 ENNPPCTVNIPIAPIYSSAQA-----LSPT---------------------QSIGLVQSLLANQN 233

  Fly   742 SYDDDSSNESQEAGAAGSQSTTVLLHQAPSNGSGPG----------------------PSCSKSI 784
            ...|..:|::...|:|.........:...|..|.||                      |......
Mouse   234 VQLDVLTNQTTAVGSAEHAGDAATQYPVSSRYSNPGQVIFGGVEMGRIIQNPPQLPLPPPPPPPP 298

  Fly   785 TRPKTISSFKN-SYSRSSSNSSCQSRHAISPLYCDG---------------------------AV 821
            ..|..:|:..: .........|.::...:..|..:|                           |.
Mouse   299 QAPMQLSAVDHGDRDHEHLQKSAKALRPVPQLAAEGDAVVFSAPQEVQVAKMNPPPPYPGTIPAA 363

  Fly   822 PTLQSPKNAVAPS----DIIFER------PAV----PAAGQTTLMSYSSNADYANNVVQVKNALM 872
            ||..:|...:.|.    |:..::      |..    |..|...:.::.|:.: ...|.:.:..::
Mouse   364 PTTAAPPPPLPPPQPPVDVCLKKGDFSLYPTAAHYQPPLGYERITTFDSSGN-VEEVCRPRTRML 427

  Fly   873 SEPVRSANSHVNPVP-LNLNLNLERMDARVKCTAPTTSSTAKRREMLYIDEETQSPTPTPSSSSM 936
            .    |.|::..|.| .:..|.|...:.:|  ..|.||:|..|..:......|..|.|.|     
Mouse   428 C----SQNTYTLPGPGSSATLRLTATEKKV--PQPCTSATLNRLTVPRYSIPTGDPPPYP----- 481

  Fly   937 KRTPTVVSIAPALPDSITRSCSVGYLDSVAITPSDEALSALRKDAPNKRLILVDKKRNRR----K 997
                   .||..|...  ||                  :|.|.|   ..||....:||.|    |
Mouse   482 -------EIASQLAQG--RS------------------AAQRLD---NSLIHATLRRNNREVALK 516

  Fly   998 RQQQEDARRHKLQQTGKSK----------------SLDSCDLLSLQTKLSSKEHEQVVRKLQEIS 1046
            .....|:.|..||...|.|                :|.:|.    |...:....:........||
Mouse   517 MPHLADSSRAPLQPLAKPKGGAAGAVAQLPARPPPALYTCS----QCSGAGPSSQSGAALAHAIS 577

  Fly  1047 DSSACSSAANTLCFKCRNNMSPSSACKRCQPSASSVLDEITAV-------VPAVEPAKESPAVQA 1104
            .|...|.::..|       :||....:......:|...|..|:       .|...|.....||..
Mouse   578 TSPLASQSSYNL-------LSPPDTSRDRTDYVNSAFTEDEALSQHCQLEKPLRHPPLPEAAVTM 635

  Fly  1105 KPAPKKRFD------------------VITSFTDSPLF-----------------------TRKH 1128
            |..|..::|                  |......|||.                       |...
Mouse   636 KRPPPYQWDPMLGEDVWVPQERTAQPTVPNPLKLSPLMLGQGQHLDVARVPFVSPKSPSSPTATF 700

  Fly  1129 RFGIGRSKETAGTENSTPLLGRKQDNGFSFVKQLSEVRWRRKE-----QPA----------QAQV 1178
            ..|.|......|:.|:..|.|.:..  .|....||:.::.::|     |||          ....
Mouse   701 PTGYGMGMPYPGSYNNPSLPGVQAP--CSPKDALSQAQFAQQESAVVLQPAYPPSLSYCTLPPTY 763

  Fly  1179 NGSSNASTLERQP---QPEITGAACGTVEAT------------------PVEAKASVSLHTQALT 1222
            .|||..|:::..|   .|..:.:.|..::.|                  |..|:....:.|:.:.
Mouse   764 PGSSTCSSVQLPPIALHPWNSYSTCPPMQNTQGTLPPKPHLVVEKPLVSPPPAELQSHMGTEVMV 828

  Fly  1223 -TLENIISRLRDLDEGRLTPPSTPQRL------------PRSSPASPAA---SKKNKRQQSNSPI 1271
             |.:|....|      .||....|||.            .|:...|..|   .|..|..::.|..
Mouse   829 ETADNFQEVL------SLTESPVPQRTEKFGKKNRKRLDSRAEEGSVQAITEGKVKKDARTLSDF 887

  Fly  1272 RHILNSPLLNRRQRKKQSIIESSDDE-----GNQTNG-------------SGEESNNAGNG---- 1314
            ..:::||.|.|.::|    ::|..|:     .|:||.             ||:|..|...|    
Mouse   888 NSLISSPRLGREKKK----VKSQKDQLKSKKLNKTNEFQDSSESEPELFISGDELMNQSQGSKKG 948

  Fly  1315 -KQYRDLETFQ-----KAQLRQKLKRGKIEPNGSASCANPAPVRREFVMHNKAPMWNEMSQVYQL 1373
             |..|.|.|..     |.:...:.:.|::...|..           :||.||.|:|||.:|||||
Mouse   949 WKSKRSLRTASELEEFKCRKASEKEDGRLGSQGFV-----------YVMANKQPLWNEATQVYQL 1002

  Fly  1374 DFGGRVTQESAKNFQIEFRGKQVMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRLK 1433
            |||||||||||||||||..|:|||||||||||||.|||||||||:|||||||||||||||
Mouse  1003 DFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506 36/58 (62%)
Tub <1355..1426 CDD:279506 59/70 (84%)
Gm2808XP_017173259.1 PHA03247 <518..826 CDD:223021 55/320 (17%)
Tub <985..1055 CDD:366500 59/69 (86%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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