DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsd and PAFAH1B2

DIOPT Version :10

Sequence 1:NP_651571.3 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster
Sequence 2:XP_016873329.1 Gene:PAFAH1B2 / 5049 HGNCID:8575 Length:242 Species:Homo sapiens


Alignment Length:256 Identity:51/256 - (19%)
Similarity:83/256 - (32%) Gaps:84/256 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 KMNSCPSDSDEVECSGHGKCRDGDCICDPMYRGEACNIAACPNNCFESKNQGHCRLDQER----C 273
            ::.:||            :||        |.:|:: |.||.|:...:.:..........|    |
Human     5 RLVTCP------------RCR--------MSQGDS-NPAAIPHAAEDIQGDDRWMSQHNRFVLDC 48

  Fly   274 SCYEG---FAGDDCSQI-SAHGAW----STVHPKHSPAPAGSASHGATIWRDTLHIVGGESYG-R 329
            ...|.   |.||...|: ..:..|    |.:|..:......:..|  .:||    :..||... :
Human    49 KDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRH--VLWR----LKNGELENIK 107

  Fly   330 GKLMSTYDFNGNVWETVHPEDGSEVPDKRYGASTVMY-------GDKIFMYGGVVKG-------- 379
            .|::..:....|     |.....||..   |...::.       ..||.:.|.:.:|        
Human   108 PKVIVVWVGTNN-----HENTAEEVAG---GIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQ 164

  Fly   380 -HGISNELWAFDVSARTWANIS--------VRADP--SCN--------ATGGTTAMCGPLH 421
             :...|:|  ..||....||:.        |.:|.  ||:        ..||...:|.|||
Human   165 KNAKVNQL--LKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLH 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsdNP_651571.3 CUB 86..212 CDD:238001
NanM <288..391 CDD:442289 20/123 (16%)
KELCH repeat 308..349 CDD:276965 8/41 (20%)
NanM 343..614 CDD:442289 24/113 (21%)
KELCH repeat 358..420 CDD:276965 18/95 (19%)
KELCH repeat 424..474 CDD:276965
KELCH repeat 482..531 CDD:276965
KELCH repeat 535..588 CDD:276965
PSI 821..870 CDD:396154
EGF_Lam 948..994 CDD:238012
EGF_Lam 995..1040 CDD:238012
PAFAH1B2XP_016873329.1 PAF_acetylesterase_like 21..230 CDD:238858 44/219 (20%)
Blue background indicates that the domain is not in the aligned region.

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