DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsd and wb

DIOPT Version :10

Sequence 1:NP_651571.3 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster


Alignment Length:1445 Identity:261/1445 - (18%)
Similarity:385/1445 - (26%) Gaps:670/1445 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 YSVS-VKCSWLIDARHPHWNRRHNTNPSRTANIRIHLREFATECGWDHLYIYDGDSVDSPLLAVF 169
            ||:| :|.|..:|. :.|.||.|                               :|.|.||:   
  Fly   389 YSLSQLKVSARLDC-NGHANRSH-------------------------------ESPDDPLM--- 418

  Fly   170 SGLMYRGNFSIRRVPQVIATSGTA------LVHFFSDDAYNMSGFNLTYKMNSCPSDSDEVECSG 228
                           |.|....|.      ....|.|..|.|.|            :.:..:|.|
  Fly   419 ---------------QCICQHNTCGAQCEQCCPLFQDRPYQMGG------------ECEICQCYG 456

  Fly   229 HGKCRDGDCICDPMYRGEACNIAACPNN-----------------------------CFESKNQG 264
            |.:    .|..||......|.  :|.||                             |..:::.|
  Fly   457 HAE----SCTYDPFLDKGICQ--SCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTG 515

  Fly   265 HCRLDQERCSCYEGFAGDDCSQISAHGAWSTVHPKHSPAPAGSASHGATIWRDTLHIVGGESYG- 328
            .|:.|...|:|.|||.|.:|.:.               ||.                    .|| 
  Fly   516 GCQSDGGSCNCLEGFQGKNCEEC---------------APG--------------------YYGD 545

  Fly   329 ---------RGKLMSTYDFNG------NVWETVHPEDGSEVPDKRYGASTVMYGDKIFMYGGVVK 378
                     ||.|.||...:|      ||       :||...:...|                  
  Fly   546 DCKRCECDERGSLGSTGSCSGVCQCKLNV-------EGSTCSECAPG------------------ 585

  Fly   379 GHGISNELWAFDVSARTWANISVRADPSCNATGGTTAMCGPLHVVGHTATLVPGYGDKNNYQYMV 443
                     .||:||.             ||.|.|:..|..:....|:|.|              
  Fly   586 ---------YFDLSAE-------------NAEGCTSCWCSGVSQTCHSAKL-------------- 614

  Fly   444 VIFGHSPNYGYLNTVQEFNFAS-REWRIVPTTGYVVKGGYGHSAAYDFLTEKVYVYGGIVSESE- 506
                           |...|.: .:|:|..     ::.....|...|..|.:: ::...:.|.| 
  Fly   615 ---------------QTLAFETLNDWKITD-----IQRVKPISIPVDAETNRL-IFANELDEVEA 658

  Fly   507 -----SSQVLSSRLYAYEPATRV---WSLLSAAPSARLLHTANFV---NQGLMMVFGGNTHNDTS 560
                 |...|.:||.:|....::   |.::....|.:.....|.:   ..||.:.||       .
  Fly   659 IYWQASLGYLGNRLTSYGSRLQLVLSWDVIRGDRSGKPTTGPNVILVGKNGLKIAFG-------D 716

  Fly   561 QSYGAKCYSQDLLVYDVYCDSW-HYHPMPGHLQADLAR-----FGHSSVVFEESLYIYGGFNGQL 619
            :|......:.::.:.:|   .| |..|....::..|.|     :...||...:.|.:....:..|
  Fly   717 ESLDGLGINLNVTLTEV---GWYHVPPTVVDIKTRLRRTEGGDYHGESVTRSQFLSVLVSLDAVL 778

  Fly   620 LNDMLRYQPGYCSYYTKQEKCTAARPGVKCIWDVQKMRCIAITQVQRSAIY---------GREQY 675
            :.         .:::|.|.:                      |.::|:.||         ...|.
  Fly   779 IR---------AAFHTDQGE----------------------TSLERAVIYSGGVELGGKSSSQV 812

  Fly   676 DYVACPSKSRLTLTSELLHDVHRCQELASCQSCVSTAFGCTYCGNGVCSKERCRETTSMASVFFE 740
            :...||:    ..|.            .||:.|   |||                   ...::..
  Fly   813 EQCLCPA----GYTG------------LSCEGC---AFG-------------------FKRIYEN 839

  Fly   741 SSTQMAVSTASP-PLNAKHLDSCPISEEYLVSSVCDQLHNCRACSANLACRWDSEHNRCKSYTSY 804
            :|....:|...| |.|. |.:||.:           |..||..|..|   .:.....||:  ..|
  Fly   840 TSDHQILSKCIPCPCNG-HSNSCDL-----------QSGNCGDCMHN---TFGDRCERCQ--LGY 887

  Fly   805 GGLALNRTQDE---VAC---------SPSCASLTN------------------CQNCTE----DE 835
            .|..|..|.::   .||         ||||...:.                  |..|.|    |.
  Fly   888 YGNPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDH 952

  Fly   836 CIWCQNE------------QRCVDRNAYTASFPYGQCREWTTFTAKCRSAPIQSTALAVGSTTAL 888
            |..|.:.            |||        ....|.|...|.....||           |:|...
  Fly   953 CQVCDDGYFGNPRQPGSSCQRC--------DCAGGPCNVTTGECITCR-----------GNTEGW 998

  Fly   889 SSAQC--GYYNSCQMCLDDPACGWCD------NGSNTGL-----GRCVVGGALAPYDDTECALKH 940
            ...:|  ||:.       |||.| ||      .||.:||     |:|:.....|.....||.:.:
  Fly   999 HCERCKLGYWG-------DPAVG-CDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGY 1055

  Fly   941 W-FFTSCPRCNCN--------------GHSYCN-------------------------------- 958
            . ....||.|||:              |..:|.                                
  Fly  1056 ANVELRCPSCNCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALR 1120

  Fly   959 ---------------------------DQQHC------EQPCNNLT---------TGAHCEKCRT 981
                                       ::.||      ...|:..|         ||..|:|||.
  Fly  1121 QNSDSDDDEWELVPDTEDPNSESTVACEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRP 1185

  Fly   982 GYWGNPINGGKCQRCDCN---GQGVYCHPDTGKCFCTTKGIVGDHCEKCD--------------S 1029
            |:| |...|..|:.|.|:   .:|..|:|.||:|.|.. |:.|.||.:|.              |
  Fly  1186 GHW-NLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKI-GVGGQHCNECTEGFFGFSTEGCQRCS 1248

  Fly  1030 QNHYHG---DPLKGSCYYEL-------------TIDYQFTFNLSKKEDRHFTQINFRNSPGK--- 1075
            .....|   ||..|.|....             |..:|......:.|..|...|..:.|.|.   
  Fly  1249 ACRSEGQVCDPHNGRCICPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQC 1313

  Fly  1076 ---------------------PE------------IDADFTITCSVPAKMDISVKRAGSPDMLIL 1107
                                 ||            ..||.:|.|.         .....|...::
  Fly  1314 QCREGYSGRKCDTCAIGYFGYPECRRCGCDAEGSFTQADGSIACD---------SNGQCPCKSLV 1369

  Fly  1108 VGVNCSTFRHRFPKTDYQFGHSPDDNSSLTTFYVF-------VHDFQPPIWIQIAFSQYPKLNLQ 1165
            ||:.|.|....      .||.|..:....|..:.|       ..|..   |..|..::...|::|
  Fly  1370 VGLKCDTCMQS------TFGLSAQNPEGCTRCFCFGRSGECEQSDLS---WGHIRMAESRNLSVQ 1425

  Fly  1166 QFFITFSSCFLLLLLMAAVLWKIK------QKYDMFRRRQRLFVEMEQMASRPFSQVLVDIENRE 1224
            |                     |:      ..|:        ::.:.||....|.:  .|.|.:.
  Fly  1426 Q---------------------IRPHSVPSSDYE--------YIVVVQMEGSSFHR--EDAEIQR 1459

  Fly  1225 SIDLSLTLEGIGHLS 1239
            ..||||..:..|::|
  Fly  1460 MNDLSLVPKSTGNVS 1474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsdNP_651571.3 CUB 86..212 CDD:238001 22/112 (20%)
NanM <288..391 CDD:442289 16/118 (14%)
KELCH repeat 308..349 CDD:276965 10/56 (18%)
NanM 343..614 CDD:442289 46/289 (16%)
KELCH repeat 358..420 CDD:276965 10/61 (16%)
KELCH repeat 424..474 CDD:276965 7/50 (14%)
KELCH repeat 482..531 CDD:276965 11/57 (19%)
KELCH repeat 535..588 CDD:276965 10/56 (18%)
PSI 821..870 CDD:396154 14/82 (17%)
EGF_Lam 948..994 CDD:238012 19/133 (14%)
EGF_Lam 995..1040 CDD:238012 18/64 (28%)
wbNP_723870.1 Laminin_N 153..398 CDD:459653 4/8 (50%)
EGF_Lam 401..450 CDD:238012 17/110 (15%)
EGF_Lam 505..552 CDD:238012 15/81 (19%)
Laminin_EGF 550..597 CDD:395007 17/93 (18%)
Laminin_B 660..813 CDD:459652 30/193 (16%)
EGF_Lam 851..900 CDD:238012 17/65 (26%)
Laminin_EGF <943..971 CDD:395007 5/27 (19%)
Laminin_EGF 974..1018 CDD:395007 17/70 (24%)
EGF_Lam 1017..1065 CDD:238012 11/47 (23%)
Laminin_EGF 1065..>1105 CDD:395007 5/39 (13%)
EGF_Lam 1150..1197 CDD:238012 14/47 (30%)
Laminin_EGF 1199..1247 CDD:395007 14/48 (29%)
EGF_Lam 1247..1292 CDD:238012 8/44 (18%)
Laminin_EGF 1294..1342 CDD:395007 7/47 (15%)
Laminin_EGF 1340..1392 CDD:395007 12/66 (18%)
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
Blue background indicates that the domain is not in the aligned region.

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