DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsd and Tmem145

DIOPT Version :9

Sequence 1:NP_001263013.1 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster
Sequence 2:XP_006540177.1 Gene:Tmem145 / 330485 MGIID:3607779 Length:604 Species:Mus musculus


Alignment Length:234 Identity:44/234 - (18%)
Similarity:69/234 - (29%) Gaps:91/234 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   565 AKCYSQDLLVYDVYCDSWHYHPMPGHLQA-DLARFGHSSVVFEESLYIYGGFNGQLLNDMLRYQP 628
            ||| .|::|:|......|     |...:| |.......||:..|        |.|::|...:|..
Mouse    66 AKC-CQNILLYFDDPSQW-----PAVYKARDKDCLAKESVIRPE--------NNQVINLTTQYAW 116

  Fly   629 GYCSYY----TKQEKCTAARPGVKCI----WDVQKMRCIAITQVQRSAIYGRE----QYDYVACP 681
            ..|...    |:...|::.| ..:.:    |.:...:|            |.:    :|:.|...
Mouse   117 SGCQVVSEEGTRYLSCSSGR-SFRSVRERWWYIALSKC------------GGDGLQLEYEMVLTN 168

  Fly   682 SKS-----------------------------------RLTLTSELLHDVHRCQELASCQSCVST 711
            .||                                   .|....:|||..::....|:....:|.
Mouse   169 GKSFWTRHFSADEFGILETDVTFLLIFTLIFVLSCYFGYLLKGRQLLHTTYKMFMAAAGVEVLSL 233

  Fly   712 AFGCTY--------CGNGVCSKERCRETTSMASVFFESS 742
            .|.|.|        .|||        ....:|.:.|.||
Mouse   234 LFFCIYWGQYATDGIGNG--------SVKILAKLLFSSS 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsdNP_001263013.1 CUB 86..212 CDD:238001
PLN02153 290..582 CDD:177814 6/16 (38%)
KELCH repeat 308..349 CDD:276965
Kelch_5 355..391 CDD:290565
KELCH repeat 358..420 CDD:276965
KELCH repeat 424..474 CDD:276965
KELCH repeat 482..531 CDD:276965
KELCH repeat 535..588 CDD:276965 7/22 (32%)
PSI 821..870 CDD:279745
EGF_Lam 948..994 CDD:238012
EGF_Lam 995..1040 CDD:238012
Tmem145XP_006540177.1 GpcrRhopsn4 157..411 CDD:370872 20/116 (17%)
PHA03247 <476..599 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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