DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsd and Paf-AHalpha

DIOPT Version :10

Sequence 1:NP_651571.3 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster


Alignment Length:112 Identity:28/112 - (25%)
Similarity:39/112 - (34%) Gaps:47/112 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 MNSC--PS-----DSDEVECSGHGK----CRD--------GDCICDPMYRGEACNIAACPNNCFE 259
            ||.|  |:     |.|:...|.|.:    ||:        ||||.:.:...||.|....|.:|..
  Fly     1 MNPCVLPTPLPDLDGDKRWHSIHRRFISDCREKDPDVIFLGDCIFETVQDTEAWNKYFAPLHCLN 65

  Fly   260 SKNQGHCRLDQERCSCYEGFAGDDCSQISAH-------GAWSTVHPK 299
            ...:                  |||::   |       ||...|:||
  Fly    66 FSIR------------------DDCTE---HVLWRIENGALDNVNPK 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsdNP_651571.3 CUB 86..212 CDD:238001
NanM <288..391 CDD:442289 6/19 (32%)
KELCH repeat 308..349 CDD:276965
NanM 343..614 CDD:442289
KELCH repeat 358..420 CDD:276965
KELCH repeat 424..474 CDD:276965
KELCH repeat 482..531 CDD:276965
KELCH repeat 535..588 CDD:276965
PSI 821..870 CDD:396154
EGF_Lam 948..994 CDD:238012
EGF_Lam 995..1040 CDD:238012
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 26/110 (24%)
Blue background indicates that the domain is not in the aligned region.

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