DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsd and NetB

DIOPT Version :10

Sequence 1:NP_651571.3 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_511155.1 Gene:NetB / 32400 FlyBaseID:FBgn0015774 Length:793 Species:Drosophila melanogaster


Alignment Length:315 Identity:73/315 - (23%)
Similarity:106/315 - (33%) Gaps:130/315 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   748 STASPPLNAKHLDSCPISEEYLVSSVCDQLHNCRACSANLACRWDSEHNRCKSYTSYG-GLALNR 811
            |||:|...|..: :.|||:.|.||..          :....|:.:...:.|.:..|.| |.||:.
  Fly   375 STAAPSAAASAV-TLPISQHYAVSDF----------AVGGRCKCNGHASECVATVSSGSGTALSD 428

  Fly   812 T---QDEVACSPSCASLTNCQNCTEDECIWCQNEQRCVDRNAYTASFPYGQCREWT---TFTAKC 870
            .   |||  .:||..||.|                            .:|:..:.:   |.|..|
  Fly   429 QDDGQDE--DTPSAPSLAN----------------------------HFGRSTQMSAKLTMTCAC 463

  Fly   871 RSAPIQSTALAVGSTTALSSAQCGYYNSCQMC----LDDPACGWCDNGSNTGLGRCVVGGALAPY 931
            :    .:||   |.             .|:.|    .|.|.....||.:|               
  Fly   464 K----HNTA---GP-------------ECERCKPFYFDRPWGRATDNDAN--------------- 493

  Fly   932 DDTECALKHWFFTSCPRCNCNGHSYCNDQQHCE-----------------QPCNNLTTGAHCEKC 979
                         .|..|.||||:     :.|.                 ..|.:.|||.:|..|
  Fly   494 -------------ECKMCQCNGHA-----RRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYC 540

  Fly   980 RTGYWGN---PINGGK-CQRCDCN---GQGVYCHPDTGKCFCTTKGIVGDHCEKC 1027
            |.||:.:   |.|..| |:||||:   ..|..|:..:|:|.| .:|:.|..|.:|
  Fly   541 REGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQCPC-KEGVTGLTCNRC 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsdNP_651571.3 CUB 86..212 CDD:238001
NanM <288..391 CDD:442289
KELCH repeat 308..349 CDD:276965
NanM 343..614 CDD:442289
KELCH repeat 358..420 CDD:276965
KELCH repeat 424..474 CDD:276965
KELCH repeat 482..531 CDD:276965
KELCH repeat 535..588 CDD:276965
PSI 821..870 CDD:396154 7/51 (14%)
EGF_Lam 948..994 CDD:238012 18/66 (27%)
EGF_Lam 995..1040 CDD:238012 13/36 (36%)
NetBNP_511155.1 LamNT 37..261 CDD:214532
EGF_Lam <458..484 CDD:238012 9/45 (20%)
EGF_Lam 498..555 CDD:238012 17/61 (28%)
EGF_Lam 560..608 CDD:238012 13/36 (36%)
NTR_netrin-1_like 661..791 CDD:239634
Blue background indicates that the domain is not in the aligned region.

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