DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsd and NetA

DIOPT Version :10

Sequence 1:NP_651571.3 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_511154.3 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster


Alignment Length:650 Identity:119/650 - (18%)
Similarity:196/650 - (30%) Gaps:279/650 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 AYEPATRVWSLLSAAPSARLLHTANFVNQGLMMVFGGNTH---------NDTSQSYGAKCYSQDL 572
            |:||...:...::||..|.::.::...:.|.........|         .|..:|:.|:..:...
  Fly    44 AHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLRSFPARSLTDLN 108

  Fly   573 LVYDVYCDSWHYHPMPGH-----LQADLA-RFGHSSVVFE--------ESLYIYGGFNGQLLNDM 623
            ...:|.|  |...|:.|.     |...|. :|..:.|:.:        :|:.||     :..:..
  Fly   109 NSNNVTC--WRSEPVTGSGDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIY-----KSTDHG 166

  Fly   624 LRYQPGYCSYYTKQEKCTAARPGVKCI--WDVQKMRCIAITQ--VQR---SAIYGREQYDYVACP 681
            |.:||  ..:::.|.:....||..:..  .:..:.||..:|:  |.|   |.:.||        |
  Fly   167 LSWQP--FQFFSSQCRRLFGRPARQSTGRHNEHEARCSDVTRPLVSRIAFSTLEGR--------P 221

  Fly   682 SKSRLTLTSELLHD----------VHRCQ----------------ELASCQSCVSTAFGCTYCGN 720
            | ||...:|.:|.|          .||.|                :|||.:..|..|.|  ..||
  Fly   222 S-SRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANG--PAGN 283

  Fly   721 GVCSKERCRETTSMASVFFESSTQMAVSTASPPLNAKHLDSCPISEEYLVSSVCDQLHNCRACSA 785
            .:                 |::....|:|:...|:            |.:|..          |.
  Fly   284 NI-----------------EANLGGDVATSGSGLH------------YAISDF----------SV 309

  Fly   786 NLACRWDSEHNRCKSYTSYGGLALNRTQDEVACSPSCASLTNCQ---NCTEDECIWCQNEQRCVD 847
            ...|       :|..:.|             .||...:...||:   |....:|      :||. 
  Fly   310 GGRC-------KCNGHAS-------------KCSTDASGQLNCECSHNTAGRDC------ERCK- 347

  Fly   848 RNAYTASFPYGQCREWTTFTAKCRSAPIQSTALAVGSTTALSSAQCGYYNSCQMCLDDPACGWCD 912
                    |:...|.|...|||..:                                        
  Fly   348 --------PFHFDRPWARATAKEAN---------------------------------------- 364

  Fly   913 NGSNTGLGRCVVGGALAPYDDTECALKHWFFTSCPRCNCNGHSYCNDQQHCE------------- 964
                                            .|..||||.|:     :.|.             
  Fly   365 --------------------------------ECKECNCNKHA-----RQCRFNMEIFRLSQGVS 392

  Fly   965 ----QPCNNLTTGAHCEKCRTGYWGN---PINGGK-CQRCDCN---GQGVYCHPDTGKCFCTTKG 1018
                |.|.:.|||.:|.:|:.|::.:   |:...| |:.|||:   ..|..|:..:|:|.| ..|
  Fly   393 GGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPC-KDG 456

  Fly  1019 IVGDHCEKCD---SQNHYHGDPLKGSCYYELTIDYQFTFNLSKKEDRHFTQINFRNS---PGKPE 1077
            :.|..|.:|.   .|:..|..|    |.              |:..|....::.:|:   |.:||
  Fly   457 VTGLTCNRCARGYQQSRSHIAP----CI--------------KQPPRMINMLDTQNTAPEPDEPE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsdNP_651571.3 CUB 86..212 CDD:238001
NanM <288..391 CDD:442289
KELCH repeat 308..349 CDD:276965
NanM 343..614 CDD:442289 23/119 (19%)
KELCH repeat 358..420 CDD:276965
KELCH repeat 424..474 CDD:276965
KELCH repeat 482..531 CDD:276965 3/13 (23%)
KELCH repeat 535..588 CDD:276965 9/61 (15%)
PSI 821..870 CDD:396154 11/51 (22%)
EGF_Lam 948..994 CDD:238012 16/66 (24%)
EGF_Lam 995..1040 CDD:238012 15/50 (30%)
NetANP_511154.3 LamNT 44..280 CDD:214532 53/255 (21%)
EGF_Lam 312..357 CDD:238012 14/79 (18%)
EGF_Lam 369..426 CDD:238012 15/61 (25%)
EGF_Lam 431..479 CDD:238012 15/52 (29%)
NTR_netrin-1_like 545..723 CDD:239634
Blue background indicates that the domain is not in the aligned region.

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