DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsd and Pafah1b3

DIOPT Version :10

Sequence 1:NP_651571.3 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_032802.1 Gene:Pafah1b3 / 18476 MGIID:108414 Length:232 Species:Mus musculus


Alignment Length:231 Identity:43/231 - (18%)
Similarity:67/231 - (29%) Gaps:77/231 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 WETVHPEDGSEVPDKRYGASTVMYGDKIFM-------------------YGGVVKGHGISNELWA 388
            |.::|....::..||.  ...|..||.:..                   :|  :.|....:.||.
Mouse    24 WMSLHHRFVADSKDKE--PEVVFIGDSLVQLMHQCEIWRELFSPLHALNFG--IGGDSTQHVLWR 84

  Fly   389 FDVS---------ARTWANISVRADPSCNATGGTTAMCGPLHVVGHTATLVPGYGDKNNYQYMVV 444
            .:..         ...|...:..:..:...|||..|:          ..||    :|...|..||
Mouse    85 LENGELEHIRPKIVVVWVGTNNHSHTAEQVTGGIKAI----------VQLV----NKLQPQARVV 135

  Fly   445 IFGHSPNYGYLNTVQEFNFASREWRIVPTTGYV------VKGGYGHSAAYDFLTEKVYVYGGIVS 503
            :.|..|...:.|.::|.|....|.......||.      ...|:.||             .|.:|
Mouse   136 VLGLLPRGQHPNPLREKNRQVNELVRAALAGYPRAHFLDADPGFVHS-------------DGTIS 187

  Fly   504 ESESSQVLSSRLYAYEPATRVWSLLSAAPSARLLHT 539
            ..:        :|.|...:|    |...|..|.||:
Mouse   188 HHD--------MYDYLHLSR----LGYTPVCRALHS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsdNP_651571.3 CUB 86..212 CDD:238001
NanM <288..391 CDD:442289 11/66 (17%)
KELCH repeat 308..349 CDD:276965 2/5 (40%)
NanM 343..614 CDD:442289 43/231 (19%)
KELCH repeat 358..420 CDD:276965 12/89 (13%)
KELCH repeat 424..474 CDD:276965 12/49 (24%)
KELCH repeat 482..531 CDD:276965 8/48 (17%)
KELCH repeat 535..588 CDD:276965 3/5 (60%)
PSI 821..870 CDD:396154
EGF_Lam 948..994 CDD:238012
EGF_Lam 995..1040 CDD:238012
Pafah1b3NP_032802.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
PAF_acetylesterase_like 8..206 CDD:238858 40/224 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.