DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5639 and Slpi

DIOPT Version :9

Sequence 1:NP_651570.1 Gene:CG5639 / 43314 FlyBaseID:FBgn0039527 Length:1511 Species:Drosophila melanogaster
Sequence 2:NP_445824.2 Gene:Slpi / 84386 RGDID:621768 Length:131 Species:Rattus norvegicus


Alignment Length:173 Identity:42/173 - (24%)
Similarity:58/173 - (33%) Gaps:76/173 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   775 VPACLPRKPGQCPYLVPPGPDNLDANTCAYECRTDAHCDGARRCCSNGCGTQCVDPQLKTACQHL 839
            :.||..|||.||.....|            ||.||..|.|.:|||.:.||.:|::|         
  Rat    33 IGACPARKPAQCLKREKP------------ECGTDWECPGKQRCCQDTCGFKCLNP--------- 76

  Fly   840 QAIQLHQSSELGIPARQMAVAQCDPNNGKWNQVQCSPDGHCWCVDDQGKILPGTRVKSPATPKCQ 904
                        :|.|              ..|:..|..   |:..|||.|    :.:|.. |||
  Rat    77 ------------VPIR--------------GPVKKKPGR---CLKFQGKCL----MLNPPN-KCQ 107

  Fly   905 ENSSFACPKTNCSLECESGYQMDSNGCPTCECRNYCNEVSCSP 947
            .:.           :|:..|:        | |...|.:| |.|
  Rat   108 NDG-----------QCDGKYK--------C-CEGMCGKV-CLP 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5639NP_651570.1 TY 38..101 CDD:238114
Lustrin_cystein 180..225 CDD:291299
TY 286..353 CDD:238114
Antistasin 373..398 CDD:280912
WAP 784..830 CDD:278522 15/45 (33%)
TY 836..903 CDD:238114 10/66 (15%)
Antistasin 911..936 CDD:280912 3/24 (13%)
Lustrin_cystein 977..1020 CDD:291299
TY 1090..1184 CDD:294100
TY <1281..1326 CDD:238114
SlpiNP_445824.2 WAP 32..76 CDD:395047 20/54 (37%)
WAP 86..131 CDD:197580 18/73 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343524
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19441
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.