DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5639 and Wfdc2

DIOPT Version :9

Sequence 1:NP_651570.1 Gene:CG5639 / 43314 FlyBaseID:FBgn0039527 Length:1511 Species:Drosophila melanogaster
Sequence 2:NP_775132.1 Gene:Wfdc2 / 286888 RGDID:628757 Length:168 Species:Rattus norvegicus


Alignment Length:168 Identity:48/168 - (28%)
Similarity:62/168 - (36%) Gaps:38/168 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   782 KPGQCPYLVPPGPDNLDANTCAYECRTDAHCDGARRCCSNGCGTQCVDPQLKTACQHLQAIQLHQ 846
            |||.||.|.|       ...|...|..|..|....:||..|||:.|..|      ..|...:|.:
  Rat    32 KPGVCPQLEP-------ITDCVKACILDNDCQDNYKCCQAGCGSVCSKP------NGLSEGKLSR 83

  Fly   847 SSELGIPARQMAVAQCDP-NNGKWNQVQCSPDGHCWCVDDQGKILPGTRVKSPATPKCQENSSFA 910
            :: .|.......:|:..| :.|   ||...|.    .|..:|    |...|....|      |..
  Rat    84 TA-TGTTTLSAGLARTSPLSRG---QVSTKPP----VVTKEG----GNGEKQGTCP------SVD 130

  Fly   911 CPKTNCSLECESGYQMDS--NGCPTCECRNYCNEVSCS 946
            .||...   ||...||||  :|...| |||.|.::.|:
  Rat   131 FPKLGL---CEDQCQMDSQCSGNMKC-CRNGCGKMGCT 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5639NP_651570.1 TY 38..101 CDD:238114
Lustrin_cystein 180..225 CDD:291299
TY 286..353 CDD:238114
Antistasin 373..398 CDD:280912
WAP 784..830 CDD:278522 15/45 (33%)
TY 836..903 CDD:238114 14/67 (21%)
Antistasin 911..936 CDD:280912 10/26 (38%)
Lustrin_cystein 977..1020 CDD:291299
TY 1090..1184 CDD:294100
TY <1281..1326 CDD:238114
Wfdc2NP_775132.1 WAP 32..73 CDD:395047 17/47 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..123 8/33 (24%)
WAP <121..167 CDD:238120 18/54 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR19441
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.