DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wdb and AT1G13460

DIOPT Version :10

Sequence 1:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_172803.1 Gene:AT1G13460 / 837906 AraportID:AT1G13460 Length:492 Species:Arabidopsis thaliana


Alignment Length:493 Identity:237/493 - (48%)
Similarity:327/493 - (66%) Gaps:15/493 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 VASVKNKAGKLNTTQTATETAIDSNEPKSEKMSSGT-FVDRIDPFAKRSLKKKGKKSQGSSRYRN 218
            ::.:..|:...|.:.:::.|:..|:...|:..:|.| ....:.|.|....|:...|..|:.    
plant     6 LSKLPKKSSSKNHSSSSSSTSKSSDNGASKSGNSQTQNAPPVKPSADSGFKEGNLKGNGNG---- 66

  Fly   219 SQDVELQQLPPLKADCSSLEQEELFIRKLRQCCVSFDFMDPVTDLKGKEIKRAALNDLSTYITHG 283
              ....:.||..| |..:.|::.||:|||..|||.|||.||..::|.|:|||..|.:|..|:...
plant    67 --FTPYEALPGFK-DVPNAEKQNLFVRKLSLCCVVFDFSDPTKNVKEKDIKRQTLLELVDYVASP 128

  Fly   284 RGVLTEPVYPEIIRMISCNLFRTL--PPSENPDFDP---EEDDPTLEASWPHLQLVYEVFLRFLE 343
            .|..:|.|..|::||:|.|:||||  .|.||...|.   ||::|:::.:|||||||||:.||.:.
plant   129 NGKFSETVIQEVVRMVSVNIFRTLNPQPRENKVIDALDLEEEEPSMDPTWPHLQLVYEILLRLIA 193

  Fly   344 SQDFQATIGKRVIDQKFVLQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRF 408
            |.:....:.|:.|||.||.:||:|||||||||||.||||||||||||:..|.||||.|||||.||
plant   194 SPETDTKLAKKYIDQSFVSRLLDLFDSEDPRERDCLKTVLHRIYGKFMVHRPFIRKSINNIFYRF 258

  Fly   409 IYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYCIVQFLE 473
            ::|||..||:.|.||||||||||||||||.|||.|||:.|:||||.|.|.:||.||:|||.||:|
plant   259 VFETEKHNGIAEFLEILGSIINGFALPLKDEHKVFLVRALVPLHKPKSLQMYHQQLSYCITQFVE 323

  Fly   474 KDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQIAKCVSSPHFQ 538
            ||..|.:.|:|||||.||.|.|.||||||.|:||:|:...||:|.:...|||||:|:|::|.|||
plant   324 KDCKLADTVIRGLLKSWPVTNSSKEVMFLNELEEVLEATQPPEFQRCMVPLFRQVARCLNSLHFQ 388

  Fly   539 VAERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSKLFD 603
            ||||||:||||::..:||.:|..||:||:||||.|.:::||||.:.:|..||.|.|.:::::||.
plant   389 VAERALFLWNNDHIENLIMQNRKVILPIIFPALERNTQKHWNQAVHSLTLNVQKIFNDIDAELFK 453

  Fly   604 ELTSSYKAERQKEKKRERDREELWKKLHEL--ESNRSS 639
            :..:.::.:..||.:....||..||:|.|:  :..:||
plant   454 DCLAKFREDESKEAEIGAKREATWKRLEEIGNQKQKSS 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdbNP_001368946.1 B56 235..633 CDD:460264 218/402 (54%)
AT1G13460NP_172803.1 B56 31..>92 CDD:474937 16/67 (24%)
B56 80..483 CDD:460264 218/402 (54%)

Return to query results.
Submit another query.