DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wdb and AT5G25510

DIOPT Version :9

Sequence 1:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_197933.1 Gene:AT5G25510 / 832626 AraportID:AT5G25510 Length:500 Species:Arabidopsis thaliana


Alignment Length:501 Identity:222/501 - (44%)
Similarity:314/501 - (62%) Gaps:29/501 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 QFPVASVKNKAGKLNTTQTATETAIDSNEPKSEKMS-SGTFVDRIDPFAKRSLKKKGKKSQGSSR 215
            :.|..|.|:.:|:||.:         |:.|.|..:. |||......|....|    ||: ..|:.
plant     8 KLPRKSSKSDSGELNRS---------SSGPVSSPVQRSGTSGGGSGPVRSNS----GKR-MSSAV 58

  Fly   216 YRNSQDVELQQLPPLKADCSSLEQEELFIRKLRQCCVSFDFMDPVTDLKGKEIKRAALNDLSTYI 280
            :..|....::.|.|.| |..|.|:..||:.|:..|||:|||.||..:...|::||..|.:|..::
plant    59 FPASVVAGIEPLVPFK-DVPSSEKLNLFVSKVSLCCVTFDFSDPGKNSIEKDVKRQTLLELLDFV 122

  Fly   281 THGRGVLTEPVYPEIIRMISCNLFRTLPPS-------ENPDFDPEEDDPTLEASWPHLQLVYEVF 338
            ..|....|||....:.||.:.||||..||:       ||.|     |:|..:.:|||||:||::.
plant   123 ASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSSSGGENDD-----DEPMFDPAWPHLQIVYDLL 182

  Fly   339 LRFLESQDFQATIGKRVIDQKFVLQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN 403
            |:|:.|....|.:.|:.:|..|:::||:||||||||||:.|||:|||:||||:..|.|:||.::|
plant   183 LKFITSPCLDAKVAKKYLDHAFIVRLLDLFDSEDPRERECLKTILHRVYGKFMVHRPFVRKSMSN 247

  Fly   404 IFLRFIYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYCI 468
            ||.||::|||..:|:.|||||.|||::|||||||.|||.||.:||:||||.|.:..|..||:|||
plant   248 IFYRFVFETEKHSGIAELLEIFGSIVSGFALPLKEEHKIFLWRVLIPLHKPKSVGNYFQQLSYCI 312

  Fly   469 VQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQIAKCVS 533
            .||::|:|.|...|::|||||||.|.||||||||||:|||::.:...:|.||..|||.:||.||:
plant   313 TQFIDKEPKLGSVVIKGLLKFWPITNSQKEVMFLGEVEEIVEAMSVMEFQKIMVPLFLRIACCVT 377

  Fly   534 SPHFQVAERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMN 598
            |.||||:||||:||||:..::||..|...|:||||.||.:.::.||||:::.|..||.|.|.||:
plant   378 SSHFQVSERALFLWNNDQIVNLIGHNRQAILPIMFTALEKNAQNHWNQSVLNLTLNVRKMFCEMD 442

  Fly   599 SKLFDELTSSYKAERQKEKKRERDREELWKKLHELESNRS-SGRTA 643
            ..||....:.:|.:..|:......|:|:|.:|....|.:. :|:||
plant   443 EALFMSCHARFKEDEAKQCSAAEKRKEVWARLENAASMKPITGKTA 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdbNP_001368946.1 B56 235..633 CDD:396263 196/404 (49%)
AT5G25510NP_197933.1 PLN00122 47..>89 CDD:215064 13/47 (28%)
B56 77..478 CDD:279883 196/405 (48%)
PLN00122 <318..485 CDD:215064 78/166 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2085
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 472 1.000 Inparanoid score I350
OMA 1 1.010 - - QHG54502
OrthoDB 1 1.010 - - D890437at2759
OrthoFinder 1 1.000 - - FOG0000226
OrthoInspector 1 1.000 - - mtm982
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10257
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X167
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.980

Return to query results.
Submit another query.