DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdb and Ppp2r5c

DIOPT Version :9

Sequence 1:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_008763181.1 Gene:Ppp2r5c / 691318 RGDID:1585097 Length:578 Species:Rattus norvegicus


Alignment Length:484 Identity:326/484 - (67%)
Similarity:376/484 - (77%) Gaps:8/484 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 PVASVKNKAGKLNTTQTATETAIDSNEPKSEKMSSGTFVDRIDPFAKRSLKKKGKKSQGSSRYRN 218
            |...||:..|......|| |..|.|.:.....:.|.|  .:|.....:.:..|..|.|.|||:..
  Rat    11 PPKPVKSGKGSKEGQDTA-EAEIASRKNSLASVQSST--SKIKVPVPQPVPVKKDKRQNSSRFNA 72

  Fly   219 SQDVELQQLPPLKADCSSLEQEELFIRKLRQCCVSFDFM-DPVTDLKGKEIKRAALNDLSTYITH 282
            |.:.|||:||.|| |....:||:|||:|||||||.|||: ||::|||.||:|||||:::..||||
  Rat    73 SNNRELQKLPSLK-DVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITH 136

  Fly   283 GRGVLTEPVYPEIIRMISCNLFRTLPPSENP---DFDPEEDDPTLEASWPHLQLVYEVFLRFLES 344
            .|.|:|||:|||.:.|.:.|:|||||||.||   :||||||:|||||:|||||||||.|||||||
  Rat   137 NRNVITEPIYPEAVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES 201

  Fly   345 QDFQATIGKRVIDQKFVLQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFI 409
            .|||..|.|:.||||||||||||||||||||||||||.|||||||||||||:|||||||||.|||
  Rat   202 PDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFI 266

  Fly   410 YETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYCIVQFLEK 474
            |||||.||:.||||||||||||||||||.|||.||:||||||||||.||:||.|||||:||||||
  Rat   267 YETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEK 331

  Fly   475 DPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQIAKCVSSPHFQV 539
            |..||||||..|||:||||.|.||||||.|:|||||||:|.:||||.||||||:|||||||||||
  Rat   332 DSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQV 396

  Fly   540 AERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSKLFDE 604
            ||||||.|||||.||||.:|.|.|:|||||:|||.||.|||:||..|:||.||.|||||.||||:
  Rat   397 AERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDD 461

  Fly   605 LTSSYKAERQKEKKRERDREELWKKLHEL 633
            .|..:|||:.|||.:.::|||.|.|:..|
  Rat   462 CTQQFKAEKLKEKLKMKEREEAWVKIENL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdbNP_001368946.1 B56 235..633 CDD:396263 298/401 (74%)
Ppp2r5cXP_008763181.1 PLN00122 63..>158 CDD:215064 55/95 (58%)
B56 88..491 CDD:279883 299/403 (74%)
PLN00122 <396..496 CDD:215064 61/95 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2085
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54502
OrthoDB 1 1.010 - - D345293at33208
OrthoFinder 1 1.000 - - FOG0000226
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100293
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X167
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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