DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wdb and ppp2r5c

DIOPT Version :9

Sequence 1:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_989248.1 Gene:ppp2r5c / 394858 XenbaseID:XB-GENE-479228 Length:577 Species:Xenopus tropicalis


Alignment Length:485 Identity:328/485 - (67%)
Similarity:385/485 - (79%) Gaps:13/485 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 KAGKLNTTQTATETAIDSNEPKSEKMSSGT----FVDRIDPFAKRSLKKKGKKSQGSSRYRNSQD 221
            ||||  :.:|..|...:.....|.|.|:.|    .|.:|.....:::.|| :|.|.|||:..|.:
 Frog    13 KAGK--SGKTGKEGQDNPEHEVSNKKSNNTPPPAQVSKIKVPTPQAVVKK-EKRQSSSRFNVSNN 74

  Fly   222 VELQQLPPLKADCSSLEQEELFIRKLRQCCVSFDFM-DPVTDLKGKEIKRAALNDLSTYITHGRG 285
            .|||:||.|| |....|||:||::|||||||.|||: ||::|||.||:|||||:::..||||.|.
 Frog    75 RELQKLPALK-DVPPAEQEKLFVQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRN 138

  Fly   286 VLTEPVYPEIIRMISCNLFRTLPPSENP---DFDPEEDDPTLEASWPHLQLVYEVFLRFLESQDF 347
            |:|||:|||::.|.:.|:|||||||.||   :||||||:|||||:|||||||||.|||||||.||
 Frog   139 VITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDF 203

  Fly   348 QATIGKRVIDQKFVLQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYET 412
            |..:.|:.||||||||||||||||||||||||||.|||||||||||||:|||||||||.||||||
 Frog   204 QPNVAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYET 268

  Fly   413 EHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYCIVQFLEKDPF 477
            ||.||:.||||||||||||||||||.|||.||:||||||||||.||:||.|||||:|||||||..
 Frog   269 EHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDST 333

  Fly   478 LTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQIAKCVSSPHFQVAER 542
            ||||||..|||:||||.|.||||||.|:|||||||:|.:|||:.||||||:||||||||||||||
 Frog   334 LTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAER 398

  Fly   543 ALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALVYNVLKTFMEMNSKLFDELTS 607
            |||.|||||.||||.:|.|.|:|||||:|||.||.|||:||..|:||.||.|||||.||||:.|.
 Frog   399 ALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQ 463

  Fly   608 SYKAERQKEKKRERDREELWKKLHEL-ESN 636
            .:|||:||||.:.::|||.|.|:..| :||
 Frog   464 QFKAEKQKEKLKLKEREEAWIKIENLAKSN 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdbNP_001368946.1 B56 235..633 CDD:396263 297/401 (74%)
ppp2r5cNP_989248.1 B56 87..490 CDD:366725 297/402 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D345293at33208
OrthoFinder 1 1.000 - - FOG0000226
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X167
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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