DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wdb and Ppp2r5d

DIOPT Version :9

Sequence 1:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_006244632.1 Gene:Ppp2r5d / 363193 RGDID:1306666 Length:672 Species:Rattus norvegicus


Alignment Length:497 Identity:326/497 - (65%)
Similarity:385/497 - (77%) Gaps:15/497 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 AGGAADQFPVASVKNKAGKLNTTQTATETAIDSNEPKSEKMSSG-----TFVDRIDPFAKRSLKK 205
            |.|.|.  |.:|.|:..|:  .|.|..:.......|.|.|..|.     |.:.:|.......:.|
  Rat    92 AKGTAK--PSSSSKDGGGE--NTDTEAQPQPQPQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVK 152

  Fly   206 KGKKSQGSSRYRNSQDVELQQLPPLKADCSSLEQEELFIRKLRQCCVSFDFM-DPVTDLKGKEIK 269
            | ::.|.|||:..|::.|||:||.|| |..:.|:|||||:|||||||.|||: ||::|||.||:|
  Rat   153 K-ERRQSSSRFNLSKNRELQKLPALK-DSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVK 215

  Fly   270 RAALNDLSTYITHGRGVLTEPVYPEIIRMISCNLFRTLPPSENP---DFDPEEDDPTLEASWPHL 331
            ||.||::..||||.|.|:||.:|||.:.|.|.|||||||||.||   :||||||:|||||:||||
  Rat   216 RAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 280

  Fly   332 QLVYEVFLRFLESQDFQATIGKRVIDQKFVLQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAF 396
            |||||.|||||||.|||..|.|:.|||||||.||:|||||||||||||||:|||||||||||||:
  Rat   281 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAY 345

  Fly   397 IRKQINNIFLRFIYETEHFNGVGELLEILGSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYH 461
            ||:|||:||.||||||||.||:.||||||||||||||||||.|||.||::|||||||||.||:||
  Rat   346 IRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYH 410

  Fly   462 AQLAYCIVQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFR 526
            .|||||:||||||:..|||||:.|||||||||.|.||||||.|:|||||||:|.:|.|:.|||||
  Rat   411 PQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFR 475

  Fly   527 QIAKCVSSPHFQVAERALYLWNNEYAMSLIEENNAVIMPIMFPALYRISKEHWNQTIVALVYNVL 591
            |:|||||||||||||||||.|||||.||||.:|.|.::|||||||||.||.|||:||..|:||.|
  Rat   476 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNAL 540

  Fly   592 KTFMEMNSKLFDELTSSYKAERQKEKKRERDREELWKKLHEL 633
            |.|||||.||||:.|..||||:||.:.|.::|||:|:|:.||
  Rat   541 KLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEEL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdbNP_001368946.1 B56 235..633 CDD:396263 294/401 (73%)
Ppp2r5dXP_006244632.1 PLN00122 126..>192 CDD:215064 25/67 (37%)
B56 180..583 CDD:279883 296/403 (73%)
PLN00122 <488..588 CDD:215064 63/95 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2085
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54502
OrthoDB 1 1.010 - - D345293at33208
OrthoFinder 1 1.000 - - FOG0000226
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100293
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X167
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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