DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdb and Twdlalpha

DIOPT Version :9

Sequence 1:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_728020.1 Gene:Twdlalpha / 326223 FlyBaseID:FBgn0052574 Length:388 Species:Drosophila melanogaster


Alignment Length:206 Identity:47/206 - (22%)
Similarity:78/206 - (37%) Gaps:47/206 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   521 QEPLFRQIAKCVSSP-HFQVAERALYLWNNEYAMSLIEENNAVIM---PIMFPALYRISKEHWNQ 581
            |||:..:....|::| ..:..||:.:|     .:...::|..|:.   |....|..::|.|:..:
  Fly   169 QEPIIHKQFFTVAAPEEHENLERSKHL-----VIGRPQKNYRVVFIKAPSSSNANVKLSAEYAPK 228

  Fly   582 TIVALVYNVLK--TFMEMN----------SK----LFDELTSSYKAERQKEKKRERDREELWKKL 630
            ....::|.:.|  ..:|:|          ||    .....|.:..:..|::.:.|.||       
  Fly   229 EEKTVIYVLSKKDNQLEVNDIATPAPTVPSKPEVFFIKYKTDAEASHAQQQIQAEYDR------- 286

  Fly   631 HELESNRSSGRTA---------GGSATTSNSAASAASTSLQPPSSAGLNSHQQQSNSGSSG---- 682
            .|..|....|..|         .|.|..:.|:.|:...|.....|.|..||.....:||:|    
  Fly   287 IEGTSEHQDGGVAPAQSVVGILDGGAIGAASSGSSNYVSGGTTGSTGGTSHYVSGGTGSTGGSYT 351

  Fly   683 --SLSSGGAGG 691
              |||.|.:||
  Fly   352 TTSLSGGTSGG 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdbNP_001368946.1 B56 235..633 CDD:396263 25/131 (19%)
TwdlalphaNP_728020.1 DM5 171..270 CDD:214776 18/103 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2085
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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