DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wdb and pptr-2

DIOPT Version :9

Sequence 1:NP_001368946.1 Gene:wdb / 43312 FlyBaseID:FBgn0027492 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_001122845.1 Gene:pptr-2 / 179526 WormBaseID:WBGene00007554 Length:607 Species:Caenorhabditis elegans


Alignment Length:517 Identity:290/517 - (56%)
Similarity:363/517 - (70%) Gaps:22/517 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 EDGDEGVGEGKGQGAGEGGGAAASAAGGAADQFPVASVKNKAGKLNTTQTATETAIDSNEPKSEK 185
            :|.:.|..|.|.:...:.......|....|...|....::..|.:          |.::.|..  
 Worm     7 KDKENGKSEKKDKEKDKKSMKDDGAGSSKASTIPTIRTEDVGGDM----------IPADAPPP-- 59

  Fly   186 MSSGTFVDRIDPFAKRSLKKKGKKSQGSSRYRNSQDVELQQLPPLKADCSSLEQEELFIRKLRQC 250
                |.:.|.:.:....:..:.::.|.||.:..||:.|||:||.:| |....|:|.|||:|||||
 Worm    60 ----TNIGRTNTYGGGPVIPRRERRQSSSMFNISQNRELQRLPAIK-DADPSERETLFIQKLRQC 119

  Fly   251 CVSFDFM-DPVTDLKGKEIKRAALNDLSTYITHG-RGVLTEPVYPEIIRMISCNLFRTLPPSENP 313
            ||.|||. |.::|||.||:||||||:|..:::.. :|.|::.||||.|.|.|.||||.|.|..||
 Worm   120 CVVFDFANDALSDLKFKEVKRAALNELVDHVSGAPKGSLSDAVYPEAIGMFSTNLFRPLSPPTNP 184

  Fly   314 ---DFDPEEDDPTLEASWPHLQLVYEVFLRFLESQDFQATIGKRVIDQKFVLQLLELFDSEDPRE 375
               :|||:||:|||||:|||||||||.||||||..|||:.:.||.|||.|:|:||.:.|||||||
 Worm   185 IGAEFDPDEDEPTLEAAWPHLQLVYEFFLRFLECPDFQSQVAKRYIDQNFILRLLMIMDSEDPRE 249

  Fly   376 RDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVGELLEILGSIINGFALPLKAEH 440
            ||||||.||||||||||.||:|||||||||..||||||..||:.||||||||||||||||||.||
 Worm   250 RDFLKTTLHRIYGKFLGHRAYIRKQINNIFYSFIYETERHNGIAELLEILGSIINGFALPLKEEH 314

  Fly   441 KQFLVKVLLPLHKVKCLSLYHAQLAYCIVQFLEKDPFLTEPVVRGLLKFWPKTCSQKEVMFLGEI 505
            |.||::|||||||||.||:||.|||||:|||:|||..|||||:.|:|:||||..|.||||||.|:
 Worm   315 KTFLLRVLLPLHKVKSLSVYHPQLAYCVVQFIEKDSSLTEPVISGMLRFWPKQHSPKEVMFLNEL 379

  Fly   506 EEILDVIDPPQFVKIQEPLFRQIAKCVSSPHFQVAERALYLWNNEYAMSLIEENNAVIMPIMFPA 570
            ||:||||:|.:|.||..|||.|||:|||||||||||||||.|||||.|||:.:|..||:|||||.
 Worm   380 EEVLDVIEPNEFQKIMTPLFSQIARCVSSPHFQVAERALYYWNNEYVMSLVADNARVIIPIMFPV 444

  Fly   571 LYRISKEHWNQTIVALVYNVLKTFMEMNSKLFDELTSSYKAERQKEKKRERDREELWKKLHE 632
            |::.||.|||:||..|:||.||.|||||.|||||.:.:|:.:|.:||....::|.:|..:.:
 Worm   445 LFKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQEKTLNEEKERIWNNIEK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdbNP_001368946.1 B56 235..633 CDD:396263 266/403 (66%)
pptr-2NP_001122845.1 B56 105..508 CDD:279883 266/402 (66%)
PLN00122 <413..508 CDD:215064 52/94 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54502
OrthoDB 1 1.010 - - D345293at33208
OrthoFinder 1 1.000 - - FOG0000226
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100293
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3
SonicParanoid 1 1.000 - - X167
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.860

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