DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5646 and CG5254

DIOPT Version :10

Sequence 1:NP_651568.1 Gene:CG5646 / 43311 FlyBaseID:FBgn0039525 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster


Alignment Length:320 Identity:73/320 - (22%)
Similarity:136/320 - (42%) Gaps:80/320 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GGACG---VLVAHPLDTIK--VWQQASNSSVVTAIQQIY-----------SRNNGVNGFYRGMFF 63
            ||:.|   |.:..|||.:|  :..||:.:....|:.:::           .|:.|::.:::|:..
  Fly    21 GGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFDCFAKMYRHEGISSYWKGIMP 85

  Fly    64 PFISTGAINSLLFGIYGNHLRQLRKVCHSDYQREQLEYHNMF-----------LAGSVAGFVQSF 117
            |.::.....::.|.::                 ||.:....|           |||..||.:::.
  Fly    86 PILAETPKRAIKFLVF-----------------EQTKPLFQFGS
PTPTPLTFSLAGLTAGTLEAI 133

  Fly   118 IACPMELIKVRLQTATYYSDYLYGQRR--TAFGTFKRILKTDGI--SGLYRGLLPMMCR----DV 174
            ...|.|::||..|...        |::  :.|...|.|::.||:  |||.:|:...|.|    ::
  Fly   134 AVNPFEVVKVAQQADR--------QKKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNM 190

  Fly   175 LPYGIYMLAYRQGVDYMDRR-DFVRRRRSQSDGSSVNLLVTTLAGAWAGVISWVCVIPFDVVKTL 238
            :.:|.|........:|.:.. :|:|:             ||  .|..||.::....|||||.|:.
  Fly   191 VYFGFYHSVKNVVPEYK
ESHLEFLRK-------------VT--IGFLAGTLACFVNIPFDVAKSR 240

  Fly   239 MQADE----NHKYRGIFHCVRVQYRAYGWRSIFRGSWMLVARAVPFNAATFLGYEYALEW 294
            :|..:    ..||||....:.:.||..|:|::::|....:.|..|..|...|.:||:.::
  Fly   241 IQGPQPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDY 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5646NP_651568.1 Mito_carr 5..79 CDD:395101 16/79 (20%)
Mito_carr 97..191 CDD:395101 27/112 (24%)
Mito_carr 207..294 CDD:395101 27/90 (30%)
CG5254NP_569856.2 Mito_carr 18..112 CDD:395101 19/107 (18%)
Mito_carr 122..207 CDD:395101 24/92 (26%)
Mito_carr 209..305 CDD:395101 29/107 (27%)

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