DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp98A and kif1ca

DIOPT Version :10

Sequence 1:NP_524532.2 Gene:Klp98A / 43310 FlyBaseID:FBgn0004387 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_068077671.2 Gene:kif1ca / 570771 ZFINID:ZDB-GENE-200303-1 Length:1185 Species:Danio rerio


Alignment Length:1075 Identity:354/1075 - (32%)
Similarity:518/1075 - (48%) Gaps:289/1075 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSLKVAVRVRPFNSREIDMDAQLIMEMENKKTRLLKPRLQSIRDAGRDNHHDFTFDYSYWSFDA- 65
            ||:|||||||||||||.:..|:.:::|::|.|.:..|:      ..:::..:|||||||||..: 
Zfish     4 SSVKVAVRVRPFNSRETNRGAKCVIQMQDKSTCITNPK------QPKESPKNFTFDYSYWSHSSE 62

  Fly    66 EDPHFATQEQVYSDLGNDVVDCAYEGYNACVFAYGQTGSGKTFTMMG--TPNNPGLIPRICEELF 128
            |||.||:|.:||.|:|.:::..|:||||.|:|||||||:||::||||  .|...|:||::||:||
Zfish    63 EDPSFASQRKVYQDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGKQDPGQQGIIPQMCEDLF 127

  Fly   129 ARMRVGQESGTGYRTHASYLEIYNERVKDLLAAQSTGHGLRVREHRSLGPYVENLSQHAVSDFDE 193
            .:.....:....:....||:|||.|||:|||..:|.| .||||||..:|||||:||:.||:::.:
Zfish   128 RQTAENTDPDLSFSVEVSYMEIYCERVRDLLNPKSKG-ALRVREHPIMGPYVEDLSKMAVTNYSD 191

  Fly   194 IQECIARGNAQRTTASTNMNDTSSRSHAIFTITFVQ--AVFMNDMPSETVSKIHLVDLAGSERAN 256
            |.:.:..||..||.|:||||:|||||||:|||.|.|  ...|..:.:|.||||.||||||||||:
Zfish   192 IADLMDTGNKARTVAATNMNETSSRSHAVFTILFTQHRHDHMTSLDTEKVSKISLVDLAGSERAD 256

  Fly   257 ATGATGQRLKEGAHINKSLVTLGSVISALAEQTGGGHNSSSSALATTPNGASK--RVLYIPYRDS 319
            ::||.|.||||||:|||||.|||.||||||:            :.:.|...||  |..:||||||
Zfish   257 SSGAKGMRLKEGANINKSLTTLGKVISALAD------------MVSPPQHGSKKRRSDFIPYRDS 309

  Fly   320 ILTWLLKDSLGGNSKTIMIAALSPADCNYSETLSTLRYANRAKNIINKPTVNEDTNVKLIRELRE 384
            :|||||:::|||||:|.|||||||||.||.|||||||||:|||.|.....:|||.|.:|:|||:|
Zfish   310 VLTWLLRENLGGNSRTAMIAALSPADINYEETLSTLRYADRAKQIKCNAVINEDPNARLVRELKE 374

  Fly   385 EINKLKSML------------------------AGDIHSLQPSLKVLAD---------------- 409
            |:|:||.:|                        .|:.|  ||||..:..                
Zfish   375 EVNRLKELLLSQGLSNLITASGSETGHPALAGVLGEPH--QPSLSYVQSTSDAPMEGVTPTSPSE 437

  Fly   410 -LQKKEAQEKV---------LTEEWTEKWKVAQSILQEQKSL------GLRKSG--VGVVLDSEM 456
             :.|:||.|::         |.|.|.||.:..:.|.|:::||      .:::.|  |||....:.
Zfish   438 PISKEEAAERLKETEKIIAELNETWEEKLRKTEEIRQDRESLLAEMGVSVKEDGGTVGVFSPKKT 502

  Fly   457 PHLIGIHND-VTTGVTLYSLKEGETRIGSEDADVAQDIELAGDGIRAQHCSIFL------KGGVV 514
            |||:.::.| :.:...:|.:|:|.||:|.||.    ||.|:|..|:..|| :|.      ...||
Zfish   503 PHLVNLNEDPLMSECLIYYIKDGVTRVGQEDV----DIRLSGQFIKELHC-VFCSEINENNEVVV 562

  Fly   515 TLHPWPLAQCWVNAHLIDEPKQISQGDIILLGRTNIFRFNNPAEAAKLRKDLSRSQ--------- 570
            ||.|...|:.:||...:.|...:.||:.|::|:.::||||:| |.|:|.::.|.:|         
Zfish   563 TLEPLVGAETYVNGKQVTEGVVLKQGNRIVMGKNHVFRFNHP-EQARLERERSATQEQQGEPVDW 626

  Fly   571 ----------------------------------------LDMSRL------------------- 576
                                                    |:..||                   
Zfish   627 SYAQKELLEKQGIDIKQEMEKRLQDLENQYRKEKEEADQILEQQRLYADSDSGDDSDKRSCEESW 691

  Fly   577 SLITSSKENL---------LTCSIYSDEDGASPYKRPERQYYPQRPMSRDDPELQDENRKILDTI 632
            .||:|.:|.|         ..|.:.|    :...:.|.|.|  |.|..|..|..|:...::  ::
Zfish   692 RLISSLREKLPANKMQSIVKKCGLPS----SGKRREPLRVY--QIPQRRRIPATQESKHRL--SV 748

  Fly   633 E----NALKQLNVERVQMHDQYKTKVRKLTEELIRLEQEEMDGLQLLNCREQELIARKDMLLWEK 693
            |    .|:|::..| |.:.|...|:             :|::.|.::..:|              
Zfish   749 EELRTQAVKEICYE-VALGDFKHTR-------------QEIEALAIVRMKE-------------- 785

  Fly   694 NNEKVQIDIVCRQISAFQTQLDSKKRDFSEYVAKELQELQDCGKLDEMGMKIEEG---------- 748
                     :||.    ..|.|.::|:..:.|||::.|        .:|:..|||          
Zfish   786 ---------LCRT----YCQKDPQERETWKSVAKDVCE--------TVGIGEEEGDREDRIAAAA 829

  Fly   749 ---------TPLNDELLLQVSDSLDLFAAQFIKDTVRRNNEEIRKLDEQIAEKERILNASTTKI- 803
                     |.:.| |...:....|:.  |.:|......:||||.|.:::.:.|:|........ 
Zfish   830 AVGGSEGGKTDMGD-LKAHIDKLTDIL--QEVKLQNNMKDEEIRSLRDRMVKMEKIFPVDVKGDD 891

  Fly   804 -------AKVDETMLEIQAQLERLRLERAE-----SEAESQAMRAKKQNMKLQLGNKSMSTSTST 856
                   |:|:|...::..:.|.....|..     .|......|.|..|.:......:..|..|.
Zfish   892 EDVEFGGARVEEPTAQVNRRNEDSGYRRGRHRWQYPEKYHDPKRRKGANNQPNNALYTPPTGHSQ 956

  Fly   857 NEADDVSKSDTYETCDTFHTAQ---SNLSLVSSPT 888
            |              :.|:||.   ||.|..|.|:
Zfish   957 N--------------NPFNTASSRPSNPSFNSQPS 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp98ANP_524532.2 KISc_KIF1A_KIF1B 2..371 CDD:276816 200/375 (53%)
Kinesin_assoc 370..478 CDD:465047 43/166 (26%)
FHA_KIF16 449..556 CDD:438760 39/113 (35%)
SMC_N 624..>864 CDD:481474 48/275 (17%)
PX_KIF16B_SNX23 1131..1259 CDD:132784
kif1caXP_068077671.2 None
Blue background indicates that the domain is not in the aligned region.

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