DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp98A and sub

DIOPT Version :9

Sequence 1:NP_524532.2 Gene:Klp98A / 43310 FlyBaseID:FBgn0004387 Length:1265 Species:Drosophila melanogaster
Sequence 2:NP_001286548.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster


Alignment Length:631 Identity:154/631 - (24%)
Similarity:221/631 - (35%) Gaps:225/631 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NKKTRLLKPRLQSIRDAGRDNHHDFTFDYSYWSFD-----------AEDPHFATQEQVY------ 77
            |||.||. ..:|...:.....:.|...:|.|.|.:           |:..:..|..||:      
  Fly    34 NKKMRLF-DNIQESEEESFSEYSDTESEYKYQSSEATEGASCATSAADSSNVETGPQVFLRLRPV 97

  Fly    78 ---------SDLGNDVV-DCAYEG---------------------------YNACV--------- 96
                     |:..|.:: .|..:.                           |:.||         
  Fly    98 KDASKAYIVSEEANVLITSCKVDSTSNNVNRMEKHFGFTSIFDSTVGQRDIYDTCVGPKIMEEEC 162

  Fly    97 ---FAYGQTGSGKTFTMMGTPNNPGLIPRICEELFA----------------------------- 129
               ..||.:|||||:|::|.....|:|||..|.:|.                             
  Fly   163 VTIMTYGTSGSGKTYTLLGDDVRAGIIPRALENIFTIYQDTVFRSPKLKLINGSIVFLQDDASLK 227

  Fly   130 --------------------RMRVGQESGTGYRTHA----------SYLEIYNERVKDLLAAQST 164
                                |::...:....:.|.|          |::|||||.|.||||....
  Fly   228 ELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFETKASTDVSVLVWVSFVEIYNELVYDLLAIPPK 292

  Fly   165 GHGLRVREHRSL-------GPYVENLSQHAVSDFDEIQECIARGNAQRTTASTNMNDTSSRSHAI 222
            ...|.....::|       ..:::.|:...|:..:|....:..|..:.|.|||::|..|||||.:
  Fly   293 QDKLGEVPRKNLKIVGNKGHVFIKGLTSVFVTSSEEALRLLRLGQQRSTYASTSVNANSSRSHCV 357

  Fly   223 FTITFVQAVFMNDMPSETVSKIHLVDLAGSERANATGATGQRLKEGAHINKSLVTLGSVISALAE 287
            ||:..::   .|.....|.|.....|||||||.|.||.:|.||||..:||.||:.||..:.|   
  Fly   358 FTVDILK---YNRSGITTQSSYKFCDLAGSERVNNTGTSGLRLKEAKNINTSLMVLGRCLDA--- 416

  Fly   288 QTGGGHNSSSSALATTPNGASKRVLYIPYRDSILTWLLKDSLGGNSKTIMIAALSPADCNYSETL 352
                         |:|.. ..|....||||||.||.||:.:|.|..|..||..::|.|..|.|.|
  Fly   417 -------------ASTVQ-KKKNADIIPYRDSKLTMLLQAALLGKEKLAMIVTVTPLDKYYEENL 467

  Fly   353 STLRYANRAKNIINK-PTVN---------------------------EDTNVKLIRELREEINKL 389
            :.|.:|:.|||||.| |.:.                           ||.||:    |:.||.:|
  Fly   468 NVLNFASIAKNIIFKEPVIKQHRVSYCGFMEFSKMSTCEGGDYTKELEDENVR----LQLEIEQL 528

  Fly   390 KSMLAGDIHSLQPSLKVLADLQKKEAQEKVLTEEWTEKWKVAQSILQEQKSLGLRKSGVGVVLDS 454
            |.     .|.||..|     |::|..:|...|         .|.|:|..|..             
  Fly   529 KY-----DHVLQMQL-----LEEKLRRELTAT---------YQEIIQNNKKQ------------- 561

  Fly   455 EMPHLIGIHNDVTTGVTLYSLKEGETRIGSEDADVAQDIELAGDGI 500
                    :.|......|.:.:|.|..:.|:.....:.||...|.|
  Fly   562 --------YEDECEKKLLIAQRESEFMLSSQRRRYEEQIEDLKDEI 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp98ANP_524532.2 KISc_KIF1A_KIF1B 2..371 CDD:276816 124/473 (26%)
KISc 3..371 CDD:214526 124/473 (26%)
Kinesin_assoc 370..478 CDD:292801 23/134 (17%)
FHA 456..555 CDD:238017 9/45 (20%)
PX_KIF16B_SNX23 1131..1259 CDD:132784
subNP_001286548.1 KISc 89..477 CDD:276812 105/407 (26%)
Kinesin 93..479 CDD:278646 105/405 (26%)
GBP_C <512..603 CDD:303769 30/132 (23%)
coiled coil 576..586 CDD:293879 3/9 (33%)
coiled coil 592..603 CDD:293879 4/8 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437721
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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