DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp98A and kif5c

DIOPT Version :10

Sequence 1:NP_524532.2 Gene:Klp98A / 43310 FlyBaseID:FBgn0004387 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_002935337.3 Gene:kif5c / 100493873 XenbaseID:XB-GENE-977474 Length:959 Species:Xenopus tropicalis


Alignment Length:1203 Identity:291/1203 - (24%)
Similarity:467/1203 - (38%) Gaps:311/1203 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLKVAVRVRPFNSREIDMDAQLIMEMENKKTRLLKPRLQSIRDAGRDNHHDFTFDYSYWSFDAED 67
            |:||..|.||.|..||....:.|...:.:.|.::.|....:                   ||...
 Frog     8 SIKVMCRFRPLNKAEIQRGDKFIPVFKGEDTVVVGPSKPYV-------------------FDKVF 53

  Fly    68 PHFATQEQVYSDLGNDVVDCAYEGYNACVFAYGQTGSGKTFTMMGTPNN---PGLIPRICEELFA 129
            |...|||.|||.....:|....:|||..:||||||.||||.||.|..::   .|:||||..::|.
 Frog    54 PSNTTQEHVYSACAKQIVKDVLDGYNGTIFAYGQTSSGKTHTMEGKLHDHQMMGIIPRIAHDIFD 118

  Fly   130 RMRVGQESGTGYRTHASYLEIYNERVKDLLAAQSTGHGLRVREHRSLGPYVENLSQHAVSDFDEI 194
            .: ...:....:....||.|||.::::|||....|  .|.|.|.::..|:|:..::..||..:|:
 Frog   119 HI-YSMDENLEFHIKVSYFEIYLDKIRDLLDVSKT--NLAVHEDKNRVPFVKGCTERFVSSPEEV 180

  Fly   195 QECIARGNAQRTTASTNMNDTSSRSHAIFTITFVQAVFMNDMPSETVS-KIHLVDLAGSERANAT 258
            .:.|..|.|.|..|.||||:.|||||:||.|...|.   |....:.:| |::||||||||:.:.|
 Frog   181 MDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQE---NVETEKKLSGKLYLVDLAGSEKVSKT 242

  Fly   259 GATGQRLKEGAHINKSLVTLGSVISALAEQTGGGHNSSSSALATTPNGASKRVLYIPYRDSILTW 323
            ||.|..|.|..:|||||..||:|||||||.|                     ..::|||||.:|.
 Frog   243 GAEGAVLDEAKNINKSLSALGNVISALAEGT---------------------KTHVPYRDSKMTR 286

  Fly   324 LLKDSLGGNSKTIMIAALSPADCNYSETLSTLRYANRAKNIINKPTVNEDTNVKLIRELREEINK 388
            :|:||||||.:|.:|...||:..|.:||.|||.:..|||.|.|..:||        .||..|   
 Frog   287 ILQDSLGGNCRTTIIICCSPSIFNEAETKSTLMFGQRAKTIKNTVSVN--------LELTAE--- 340

  Fly   389 LKSMLAGDIHSLQPSLKVLADLQKKEAQEKVLTEEWTEKWKVAQSILQE-QKSLGLRKSGVGVVL 452
                                :.:||..:||       :|.|..::|:|. :..|...:.|..|.:
 Frog   341 --------------------EWKKKYEKEK-------DKTKSLKNIIQHLEMELNRWRRGEAVPV 378

  Fly   453 DSEMPHLIGIHNDVTTGVTLYSLKEGETRIGSEDADVAQDIELAGDGIRAQHCSIFLKGGVVTLH 517
            |.:.                 |.|:.:|                                     
 Frog   379 DEQT-----------------SAKDQKT------------------------------------- 389

  Fly   518 PWPLAQCWVNAHLIDEPKQISQGDIILLGRTNIFRFNNPAEAAKLRKDLSR--SQLD------MS 574
               |..|       |....|..|   |:|.|||    :..|..|..:|::.  .|||      ..
 Frog   390 ---LEPC-------DNTPVIDNG---LVGATNI----SSEEKKKYDEDIASLYGQLDDKDDEINQ 437

  Fly   575 RLSLITSSKENLLTCSIYSDEDGASPYKRPERQYYPQRPMSRDDPELQDENRKILDTIENALKQL 639
            :..||...|:.:|                             |..||....|:..:.|:..|.:|
 Frog   438 QSQLIEKLKQQML-----------------------------DQEELLASTRRDYEKIQEELTRL 473

  Fly   640 NVERVQMHDQYKTKVRKLTEELIRLEQ--EEMDGLQLLNCREQELIARKDMLLWEKNNEKVQIDI 702
            .:|.....|:.|..::.|.|..:..:|  :|::....||          :.|..|...:...:.:
 Frog   474 QIENDAAKDEVKEVLQALEELAVNYDQKSQEVEDKTKLN----------EQLSEELTQKTTNLTV 528

  Fly   703 VCRQISAFQTQLDSKKRDFSEYVAKELQELQDCG---------KLDEMGMKIEEG--------TP 750
            ..|::|..|...:.:::..:|.:...|::|.:.|         .|.|:...|||.        :.
 Frog   529 TQRELSQLQELSNHQRKRTTEILNLLLKDLGEIGGIVGTNDVKTLAEVNGVIEEEFTMARLYISK 593

  Fly   751 LNDELLLQVSDSLDLFAAQFIKDTVRRNNEEIRKLDEQIAEKERILNASTTKIAKVDETMLEIQA 815
            :..|:...|:.|..|.:||.      ..|.:|...::::|..:.:.:....||..:.:.|..::.
 Frog   594 MKSEVKSLVNRSKQLESAQI------EANRKINASEKELAACQLLSSQHEAKIKSLTDYMQNMEQ 652

  Fly   816 QLERLRLERAESEAESQAMR--AKKQNMKLQLGNKSMSTSTSTNEADDVSKSDTYETCDTFHTAQ 878
            :  |.:||.|:.....:..|  |:::..|:...:|.....|...:|:::.|  |.|.....|   
 Frog   653 R--RRQLEEAQDALNEELARLHAQEKMHKVSFQDKEKEHLTRLQDAEEIKK--TLEQQMESH--- 710

  Fly   879 SNLSLVSSPTITEGQQSPLSNCSCDAEDEAEDTRK--DDLSGSSEETSRTCTAGPSSGSGSGSVG 941
                       .|..|..||.    ..||.|:.:|  |||...:::...                
 Frog   711 -----------REAHQKQLSR----LRDEIEEKQKMIDDLKDLNQKLQL---------------- 744

  Fly   942 IGGSGSAPSCTPSSQAIMSDSGVCLDSRNQAILQNGHLNNYKQAVRTSDEDTGSCSSCELGRHSD 1006
                 .....|...:.:.::     :.:.:..||...|.|.|:  ..|.||.       .|....
 Frog   745 -----QLDKLTSDYEKLKTE-----EEQREEDLQKLVLLNEKR--EQSREDL-------KGLEET 790

  Fly  1007 VARPYCPLHSLRRKIAAQKAL-IMKNLETDLNK-----AQ------LDEHIADLQDLQRRYIQME 1059
            |||....||:||:......|| :.|.:|.|.:.     ||      |:.::..|..:.::.::..
 Frog   791 VARELQTLHNLRKLFIQDLALRVQKRVELDSDNGGGSAAQKQKISFLENNLEQLTKVHKQLVRDN 855

  Fly  1060 QEMLQSVQDLEAHAQCCADERSGMERQY-ELASSIMRSSVMSPTSMEESTSQIYSPSMTRSCPS- 1122
            .::...:..||...:..|:....:|... |...:.||........::.....:.:.::.|..|| 
 Frog   856 ADLRCELPKLEKRLRATAERVKALEGALKEAKENAMRDRRRYQQEVDRIKEAVRAKNIARRAPSA 920

  Fly  1123 --MREFPEGEHFITIPSFV--MRGAGKQTHYEY 1151
              .:....|.:..:.|:.|  :||.|..||..|
 Frog   921 QIAKPIRPGHYPASSPTAVHSIRGGGGSTHSSY 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp98ANP_524532.2 KISc_KIF1A_KIF1B 2..371 CDD:276816 139/371 (37%)
Kinesin_assoc 370..478 CDD:465047 19/108 (18%)
FHA_KIF16 449..556 CDD:438760 15/106 (14%)
SMC_N 624..>864 CDD:481474 49/260 (19%)
PX_KIF16B_SNX23 1131..1259 CDD:132784 8/23 (35%)
kif5cXP_002935337.3 KISc_KHC_KIF5 6..327 CDD:276820 137/364 (38%)
EnvC 452..>676 CDD:443969 47/241 (20%)
SMC_prok_B 580..>912 CDD:274008 73/394 (19%)
Khc_CBD_cc 836..905 CDD:467880 9/68 (13%)

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