DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr98d and Gr39b

DIOPT Version :9

Sequence 1:NP_733214.1 Gene:Gr98d / 43309 FlyBaseID:FBgn0046885 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster


Alignment Length:412 Identity:84/412 - (20%)
Similarity:168/412 - (40%) Gaps:77/412 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLAAARPYIQIYSIFGLTPPIQFFTRT--LHKRRRGIVIL------GYACYL-----ISISLMVI 59
            :|.:..||::.:::.||.|..:...::  :.|....|:|:      |.:.|.     :.:|||| 
  Fly     1 MLYSFHPYLKYFALLGLVPWSESCAQSKFVQKVYSAILIILNAVHFGISIYFPQSAELFLSLMV- 64

  Fly    60 YECYANIVALQKDIHKFHAEDSSKVMGNTQKVLVVAMFVWNQLNILLNFRRLARIYDDIADLEID 124
                 |::..                  ..:::.|.:.:   |.:::::....|...::..|.:.
  Fly    65 -----NVIVF------------------VARIVCVTVII---LQVMVHYDDYFRFCREMKYLGLR 103

  Fly   125 LNNASSGFVGQRHWWRFRFRLALSVGLWIVLLVGLTPRFTLVALGPYLHWTNKVLTEIILIMLQL 189
            |.......||:..|..:...|||.:|    .||.:.|...:...|..|::.:.:|: |::|.:| 
  Fly   104 LQCELKIHVGRLKWQSYAKILALGIG----FLVTVLPSIYVALSGSLLYFWSSLLS-ILIIRMQ- 162

  Fly   190 KCTEYCVFVLLIYELILRGRHI------LQQI--------SVELEGNQSRDSVQELCVALKRNQL 240
                   |||::..:.|.|.|:      ||.:        :..|:||.:|....|..:|||::.:
  Fly   163 -------FVLVLLNVELLGHHVSLLGIRLQNVLECHLMGANCTLDGNANRLCSLEFLLALKQSHM 220

  Fly   241 LAGRIWGLVNEVSLYFTLSLTLLFLYNELTILQIVNWALIKSVNPNECCQYRRVGTCLLLSI--- 302
            ....::...|::..:..|. |.:.|:::.|:  .:.|.....|   |..:|:.:.....:.:   
  Fly   221 QLHYLFTHFNDLFGWSILG-TYVVLFSDSTV--NIYWTQQVLV---EVYEYKYLYATFSVFVPSF 279

  Fly   303 -NIFLSCLYSEFCIQTYNSISRVLHQMYCLSAAEDYLILKMGLREYSLQMEHLKLIFTCGGLFDI 366
             ||.:.|...|||.:....|...|..:.|..:.......|..|.|:.||:|...|.....|....
  Fly   280 FNILVFCRCGEFCQRQSVLIGSYLRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINAEGFMST 344

  Fly   367 NLKFFGGMVVTLFGYIIILVQF 388
            :......::.....|:|:|:||
  Fly   345 DNSLLMSILAAKVTYLIVLMQF 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98dNP_733214.1 7tm_7 13..392 CDD:285581 83/407 (20%)
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 83/408 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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