DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98d and Gr98b

DIOPT Version :9

Sequence 1:NP_733214.1 Gene:Gr98d / 43309 FlyBaseID:FBgn0046885 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster


Alignment Length:403 Identity:212/403 - (52%)
Similarity:281/403 - (69%) Gaps:0/403 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEANRSRLLAAARPYIQIYSIFGLTPPIQFFTRTLHKRRRGIVILGYACYLISISLMVIYECYAN 65
            |.|.:|||||.|.||:.|:|:|.||||.|.|..|.|:|.|..::.||..|..:|...|....|.|
  Fly     1 MVAQKSRLLARAFPYLDIFSVFALTPPPQSFGHTPHRRLRWYLMTGYVFYATAILATVFIVSYFN 65

  Fly    66 IVALQKDIHKFHAEDSSKVMGNTQKVLVVAMFVWNQLNILLNFRRLARIYDDIADLEIDLNNASS 130
            |:|:.:::.:::..|.::||||.||.|...|.:.|.||:|:|:|||..||.||||||:|::.||.
  Fly    66 IIAIDEEVLEYNVSDFTRVMGNIQKSLYSIMAIANHLNMLINYRRLGGIYKDIADLEMDMDEASQ 130

  Fly   131 GFVGQRHWWRFRFRLALSVGLWIVLLVGLTPRFTLVALGPYLHWTNKVLTEIILIMLQLKCTEYC 195
            .|.|||..:.||||:||.||:|::|:||..||.|:.|:||::....|:|||.::||.|||..|||
  Fly   131 CFGGQRQRFSFRFRMALCVGVWMILMVGSMPRLTMTAMGPFVSTLLKILTEFVMIMQQLKSLEYC 195

  Fly   196 VFVLLIYELILRGRHILQQISVELEGNQSRDSVQELCVALKRNQLLAGRIWGLVNEVSLYFTLSL 260
            ||||:||||:||.|..|.|:..|.:..:.:|.:|.|||||||||||.||||.|..:|..|||.::
  Fly   196 VFVLIIYELVLRLRRTLSQLQEEFQDCEQQDMLQALCVALKRNQLLLGRIWRLEGDVGSYFTPTM 260

  Fly   261 TLLFLYNELTILQIVNWALIKSVNPNECCQYRRVGTCLLLSINIFLSCLYSEFCIQTYNSISRVL 325
            .||||||.||||.:||||.|.....:.||||.|...|..|.:|:.|.||.|:.||..||...|:|
  Fly   261 LLLFLYNGLTILHMVNWAYINKFLYDSCCQYERFLVCSTLLVNLLLPCLLSQRCINAYNCFPRIL 325

  Fly   326 HQMYCLSAAEDYLILKMGLREYSLQMEHLKLIFTCGGLFDINLKFFGGMVVTLFGYIIILVQFKI 390
            |::.|.||..::.:|..||||||||||||||.||||||||||||:|||::||:|||||||:|||:
  Fly   326 HKIRCTSADPNFAMLTRGLREYSLQMEHLKLRFTCGGLFDINLKYFGGLLVTIFGYIIILIQFKV 390

  Fly   391 QFFAQSNFMQNIN 403
            |..|.:.:.:.:|
  Fly   391 QAIAANRYKKVVN 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98dNP_733214.1 7tm_7 13..392 CDD:285581 201/378 (53%)
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 201/377 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2F6UU
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014335
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.