DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98a and Gr22b

DIOPT Version :9

Sequence 1:NP_651564.1 Gene:Gr98a / 43305 FlyBaseID:FBgn0039520 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001014456.1 Gene:Gr22b / 117492 FlyBaseID:FBgn0045500 Length:386 Species:Drosophila melanogaster


Alignment Length:365 Identity:69/365 - (18%)
Similarity:120/365 - (32%) Gaps:145/365 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LMKCLGMLPFGQ--NLFSKGF---------CYVLLFVSLGFSSYWRFSFDYEFDYDFLNDRFSST 72
            :.|||.:|  ||  :.|:..|         |.|||...:.||               ||      
  Fly   145 IQKCLTIL--GQLLSFFTLNFALPGLEFHICLVLLSCLMEFS---------------LN------ 186

  Fly    73 IDLSNFVALVLGHAIIVLELLWGNCSKDVDRQLQAIHSQIKLQLGTSNSTDRVRRYCNWIYGSLI 137
            :::.::...||    ::...:|     .::.||:.:.||:||...|..|  |:.::.: :|..| 
  Fly   187 LNIMHYHVGVL----LIYRYVW-----LINEQLKDLVSQLKLNPETDFS--RIHQFLS-LYKRL- 238

  Fly   138 IRWLIFIVVTIYSNRALTINATYSELVFLARFSEFTLYCAVILFIYQELIVGGSNVLDELYRTRY 202
                      :..||.|.|...|...:|:  .::.:....||.|    |||.|            
  Fly   239 ----------LELNRKLVIAYEYQMTLFI--IAQLSGNIVVIYF----LIVYG------------ 275

  Fly   203 EMWSIRRLSLQKLAKLQAIHNSLWQAIRCLECYFQLSLITLLMKFFIDTSALPYWLYLSRVEHTR 267
              .|:|..|:..:|...::..::|.                            :||         
  Fly   276 --LSMRTYSIFLVAFPNSLLINIWD----------------------------FWL--------- 301

  Fly   268 VAVQHYVATVECIKLLEIVVPCYLCTRCDAMQRK------FLSMFYTVTTDRRSSQLNAALRSLN 326
                       ||            ..||..::.      .|.:|..:  :.|..:|..::....
  Fly   302 -----------CI------------AACDLTEKAGDETAIILKIFSDL--EHRDDKLEMSVNEFA 341

  Fly   327 LQLSQEKYKFSAGGMVDINTEMLGKFFFGMISYIVICIQF 366
            ...|..|::|...|:..:|..|..|.......|:|..:||
  Fly   342 WLCSHRKFRFQLCGLFSMNCRMGFKMIITTFLYLVYLVQF 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98aNP_651564.1 7tm_7 13..370 CDD:285581 69/365 (19%)
Gr22bNP_001014456.1 7tm_7 17..385 CDD:285581 69/365 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.