DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a18 and cyp3a4.2

DIOPT Version :9

Sequence 1:NP_001287562.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001015786.1 Gene:cyp3a4.2 / 548503 XenbaseID:XB-GENE-971750 Length:504 Species:Xenopus tropicalis


Alignment Length:520 Identity:153/520 - (29%)
Similarity:257/520 - (49%) Gaps:65/520 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TYFLFQVAVALLAIVTYILHRKLTYFKRRGIPYDKPHPLRGNMEGYKKTRTVHEIHQEYYNKYRN 68
            |:.|  :|..|:.|:.|.:. ...|||:.|||...|.|..|....::|...  :...|.:.||  
 Frog    11 TWIL--LAALLVLILLYGIW-PYGYFKKMGIPGPTPLPFIGTFLEFRKGMV--QFDTECFKKY-- 68

  Fly    69 SKAPFVGFYLFQKPAAFVIDLELAKQILIKN-FSNFTDKGIYYNEKDDPMSAHLFNLDGP----- 127
              ....|.|..::|...::|..:.|.||:|. ::|||::             ..|.|:||     
 Frog    69 --GKMWGTYDGRQPVLAIMDPAIIKTILVKECYTNFTNR-------------RNFGLNGPFESAI 118

  Fly   128 ------QWRLLRSKLSSTFTSGKMKFMYPTVVSVAEEFMAVMHEKVSENSILDVRDLVARFTVDV 186
                  ||:.:|:.||.||||||:|.|:..:...::..:..:...|.::.....:|::..:::||
 Frog   119 TIAEDEQWKRIRNVLSPTFTSGKLKEMFQIMKDYSDILVKNIQGYVEKDEPCATKDVIGAYSMDV 183

  Fly   187 IGTCAFGIKCNSLRDEKAEF-LHFGRRALLDSRHGNLVSGLM---RSYPNLARRL-GLCRNTAQI 246
            |.:.:|.:..:||......| :|.  :.||.:   .|:|.|:   ..:|.|...| ||..|... 
 Frog   184 ITSTSFSVNIDSLNKPSDPFVIHM--KKLLKT---GLLSPLLILVVIFPFLRPILEGLNLNFVP- 242

  Fly   247 QEFYQRIVKETVTLREK----ENIKRNDFMDMLIGLKNQKNMTLENGEVVKGLTMDEIVAQAFVF 307
            ::|.:..:....:.|||    ::..|.|.:.:::..:......|.|..  |.||..||:||:.:|
 Frog   243 KDFTEFFMNAVTSFREKRKKGDHSGRVDLLQLMMDSRTTGGNDLSNKH--KALTDAEIMAQSVIF 305

  Fly   308 FIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVLEQHDQKFTYECIKDLKYLDQVINETLRH 372
            .:||::|:|:.:.:..|.||.:|.:|.::..|:...|...... ||:.:..::|||.||.||||.
 Frog   306 IVAGYETTSTALSYLFYNLATHPDVQQRLHEEIDSFLPDKASP-TYDILMQMEYLDMVIQETLRL 369

  Fly   373 YTIVPNVDRVAAKRFVVPG--NPKFVIEAGQSVIIPSSAIHHDPSIYPEPNEFRPERFSPEESAK 435
            :.....::||:.:...:.|  .||.::     .:||:..:..||..:|||.||||||||.|..|.
 Frog   370 FPPAGRLERVSKQNVEINGVSIPKGIV-----TLIPAYVLQRDPEYWPEPEEFRPERFSKENRAT 429

  Fly   436 RPSVAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNFTFSPCSATPDPLTF------DPHSAILL 494
            .....:||||:||||||||||..:..::.:..|::||:..||:.|..|:.|      .|...|:|
 Frog   430 HTPFTFLPFGDGPRNCIGLRFALLSMKVAIVTLLQNFSVRPCAETLIPMEFSTIGFLQPKKPIVL 494

  Fly   495  494
             Frog   495  494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a18NP_001287562.1 p450 38..504 CDD:278495 141/486 (29%)
cyp3a4.2NP_001015786.1 p450 39..496 CDD:365848 142/489 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 239 1.000 Domainoid score I2234
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3174
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm9369
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.