DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a18 and Cyp28c1

DIOPT Version :10

Sequence 1:NP_651563.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster


Alignment Length:515 Identity:140/515 - (27%)
Similarity:249/515 - (48%) Gaps:43/515 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFQVAVALLAIVTYILHRKLTYFKRRGIPYDKPHPLRG---NMEGYKKTRTVHEIHQEYYNKYRN 68
            |..:|..|.||..::: ....:::|||:...:..||.|   ||...::..|:.  .::.|..|||
  Fly     6 LLGIATLLGAIYAFLV-SNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMD--MRDIYMHYRN 67

  Fly    69 SKAPFVGFYLFQKPAAFVIDLELAKQILIKNFSNFTDKGIYYNE--------KDDPMSAHLFNLD 125
            :.: :||.||.:.|...|::..|..:|.:..||:|.:     |:        ||..::.:.|.|:
  Fly    68 THS-YVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFEN-----NDASKMVDIAKDRLVALNPFVLE 126

  Fly   126 GPQWRLLRSKLSSTFTSGKMKFMYPTVVSVAEEFMAVMHEKVSENSILDVRDLVARFTVDVIGTC 190
            |.:||..|:..|:..|:|:::..:..:..|..:....:..|.:....||..||..|||.:.:..|
  Fly   127 GEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDC 191

  Fly   191 AFGIKCNSLRDEKAEFLHFGRRALLDSRHGNLVSGLMRS-YPNLARRLGLCRNTAQIQEFYQRIV 254
            ..||:..:..|.....:........::| |..::|.:.. :|||.|.|...........||.:::
  Fly   192 VLGIQARTFTDNPLPVVRQNHEMSAENR-GLAIAGAVHGLFPNLPRWLRPKVFPRSHDRFYGQMI 255

  Fly   255 KETVTLREKENIKRNDFMDMLIGLKNQKNMTLENGEVVKGLTMDEIVAQAFVFFIAGFDTSSSTM 319
            .|.:.||..::.:||||::.|:.::.:.:           |:.:::.:.|..|...|.||:|:::
  Fly   256 SEALRLRRSKHQERNDFINHLLEMQRELD-----------LSEEDMASHAMTFMFDGLDTTSNSI 309

  Fly   320 GFALYELAKNPSIQDKVRAELGQVLEQHDQKFTYECIKDLKYLDQVINETLRHYTIVPNVDRVAA 384
            ...|..|.:||..|.::..|| |::.........:.:.||.||....||:||.|.......:...
  Fly   310 AHCLLLLGRNPDCQRRLYEEL-QLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCT 373

  Fly   385 KRFVVPG---NPKFVIEAGQSVIIPSSAIHHDPSIYPEPNEFRPERF--SPEESAKRPSVAWLPF 444
            |.:.:.|   :....:..|..|::|..|:|:||.:||||:.||||||  ...::.|:..: :|.|
  Fly   374 KEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGI-FLGF 437

  Fly   445 GEGPRNCIGLRFGQMQARIGLAMLIKNFTFSPCSATPDPLTFDPHSAILLGI-KGGIQLK 503
            |.|||.|:|:|.|...|:..||.:::.|.......|.:....||  .|.:|: ||||.|:
  Fly   438 GNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELDP--LIFVGVHKGGIWLQ 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a18NP_651563.1 CYP6-like 70..500 CDD:410679 119/444 (27%)
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 121/447 (27%)

Return to query results.
Submit another query.