DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a18 and Cyp4d1

DIOPT Version :9

Sequence 1:NP_001287562.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster


Alignment Length:554 Identity:129/554 - (23%)
Similarity:227/554 - (40%) Gaps:103/554 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFQVAVALLAIVTYI----LHRKLTYFKR-----RGIPYDKPHPLRGN------MEGYKKTRTVH 56
            :|.|..|:||...::    .|.|   |||     ..:|.....||.|:      ...::..:.:.
  Fly     1 MFLVIGAILASALFVGLLLYHLK---FKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIF 62

  Fly    57 EIHQEYYNKYRNSKAPFVGFYLFQKPAAFVI-----DLELAKQILIKNFSNFTDKGIYYNEKDDP 116
            |..:.|      ||...:..:|  .|...|:     |:|:....|     .|.||...|...:..
  Fly    63 EFMETY------SKDQVLKVWL--GPELNVLMGNPKDVEVVLGTL-----RFNDKAGEYKALEPW 114

  Fly   117 MSAHLFNLDGPQWRLLRSKLSSTFTSGKMKFMYPTVVSVAEEFMAVMHEKVSENSILDVR----- 176
            :...|....|.:|...|..::..|.           ..:.::|:.|. ||.|.:.:.::.     
  Fly   115 LKEGLLVSRGRKWHKRRKIITPAFH-----------FKILDQFVEVF-EKGSRDLLRNMEQDRLK 167

  Fly   177 ---------DLVARFTVDVIGTCAFGIKCNSLRDEKAEFLHFGR--RALLDSRHGNLVSGLMRSY 230
                     |.:...|:|.|...|.|:..|:..:..:|::...:  ..:|..|..|::.....:|
  Fly   168 HGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTY 232

  Fly   231 --PNLARRLGLCRNTAQIQEFYQRIVKETVTLREKENIKR-------NDFMDMLIGLKNQKNMTL 286
              ..|||......|.  :.:|.::|:.:    |.:|.|:.       ||..|  :|.|.:.... 
  Fly   233 MLTPLARAEKKALNV--LHQFTEKIIVQ----RREELIREGSSQESSNDDAD--VGAKRKMAFL- 288

  Fly   287 ENGEVVKGLTMDE-------IVAQAFVFFIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVL 344
               :::...|:||       |..:...|...|.||:||.:.|..|.:|.:|..|.|...|:..|:
  Fly   289 ---DILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVV 350

  Fly   345 -EQHDQKFTYECIKDLKYLDQVINETLRHYTIVPNVDRVAAKRFVVPGNPKFVIEAGQSVIIPSS 408
             .......:||.:..|.|:|..:.||||.|..||.:.|...:...:.|.   :|.||.::.|...
  Fly   351 GNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGK---LIPAGTNIGISPL 412

  Fly   409 AIHHDPSIYPEPNEFRPERFSPEESAKRPS-VAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNF 472
            .:.....::.|||.|:||||....:|::.: .|::||..|||||||.:|..::.:..:|.:::::
  Fly   413 YLGRREELFSEPNIFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHY 477

  Fly   473 --TFSPCSATPDPLTFDPHSAILLGIKGGIQLKV 504
              .|...|:.|..|.    :.::|..|..:..||
  Fly   478 EVDFVGDSSEPPVLI----AELILRTKEPLMFKV 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a18NP_001287562.1 p450 38..504 CDD:278495 116/512 (23%)
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 117/515 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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