DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a18 and Cyp4a3

DIOPT Version :9

Sequence 1:NP_001287562.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:544 Identity:133/544 - (24%)
Similarity:224/544 - (41%) Gaps:98/544 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FLFQVAVALLAIVTYILHRKLTYFKRRGIPYDKPHPLRGNMEGYKKTRTVHEIHQEYYNKYRNSK 70
            ||..:.:.|...|.:.|.|:.........|....|.|.|           |::....:.:.....
  Rat    23 FLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWG-----------HDLKDREFQQVLTWV 76

  Fly    71 APFVGFYL----FQKPAAFVIDLELAKQILIKNFSNFTDKGIYYNEKDDPMSAHLFN-------- 123
            ..|.|..|    ..|....:.|.:..|.:|               .:.||.::.::.        
  Rat    77 EKFPGACLQWLSGSKTRVLLYDPDYVKVVL---------------GRSDPKASGIYQFLAPWIVS 126

  Fly   124 --------LDGPQWRLLRSKLSSTFTSGKMKFMYPTVVSVAEEFMAVMHEKV-SENSILDVRDLV 179
                    |:|.:|......|:..|..|.:| .|..:::.:...|....||: .::..|::...|
  Rat   127 GTGYGLLLLNGKKWFQHWRMLTPAFHYGILK-PYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYV 190

  Fly   180 ARFTVDVIGTCAFG------IKCNSLRDEKA----EFLHFGRRALLDSRHGNLVSGLMRSYPNLA 234
            :..|:|.:..|||.      :..||....||    ..|.|.|  :..:.:||.:...|.|...|:
  Rat   191 SLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLTFFR--VRSAFYGNSIIYNMSSDGRLS 253

  Fly   235 RRL---------GLCR-NTAQIQEFYQRIVKETVTLREKENIKRNDFMDMLIGLKNQKNMTLENG 289
            ||.         |:.: ..||:|.     .:|....|:|.::   ||:|:|:..|      :|:|
  Rat   254 RRACQIAHEHTDGVIKMRKAQLQN-----EEELQKARKKRHL---DFLDILLFAK------MEDG 304

  Fly   290 EVVKGLTMDEIVAQAFVFFIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVLEQHDQKFTYE 354
               |.|:.:::.|:...|...|.||::|.:.:..|.||.:|..|::.|.|:..:|.. ....|::
  Rat   305 ---KSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGD-GTSVTWD 365

  Fly   355 CIKDLKYLDQVINETLRHYTIVPNVDRVAAKRFVVPGNPKFVIEAGQSVIIPSSAIHHDPSIYPE 419
            .:..:.|....|.|.||.|..||:|.|..:.....|....  |..|.:..|....:||:||.:|.
  Rat   366 HLDQISYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRS--IPKGITTTILIYGLHHNPSYWPN 428

  Fly   420 PNEFRPERFSPEESAKRPSVAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNFTFSPCSATPDPL 484
            |..|.|.||||:  :.|.|.|:|||..|.|||||.:|...:.::.:|:.:..|     ...|||.
  Rat   429 PKVFDPSRFSPD--SPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRF-----ELLPDPT 486

  Fly   485 TFD-PHSAILLGIKGGIQLKVEAI 507
            ... |.:.::|..|.||.|:::.:
  Rat   487 RIPVPMARLVLKSKNGIHLRLKKL 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a18NP_001287562.1 p450 38..504 CDD:278495 126/507 (25%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 121/481 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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