DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a18 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_651563.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:508 Identity:137/508 - (26%)
Similarity:219/508 - (43%) Gaps:86/508 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VAVALLAIVTYILHRKLTYFKR----RGIP-YDKPHPLRGNMEGYKKTRTVHEIHQ---EYYNKY 66
            |:||...::..||...::|.::    |.|| ..:.:||.|:....|...|  |..|   :|..::
  Rat    22 VSVAGATVLLNILQMLVSYARKWQQMRPIPSVARAYPLVGHALFMKPNNT--EFFQQIIQYTEEF 84

  Fly    67 RNSKAPFVGFYLFQKPAAFVIDLELAKQILIKNFSNFTDKGIYYNEKDDPMSAHLFNLDGPQWRL 131
            |:  .|.:..::...|...:...|..:.||..  |...||...|......:...|....|.:||.
  Rat    85 RH--LPIIKLWIGPVPLVALYKAENVEVILTS--SKQIDKSFMYKFLQPWLGLGLLTSTGSKWRA 145

  Fly   132 LRSKLSSTFTSGKMKFMYPTVVSVAEEFMAVMHEKVSENSILDVRDLVARFTVDV------IGTC 190
            .|..|:.:|.           .::.|:|:.||:|:.   :|| |..|......:.      |..|
  Rat   146 RRKMLTPSFH-----------FTILEDFLDVMNEQA---NIL-VNKLEKHVNQEAFNCFFPITLC 195

  Fly   191 AFGIKCNSLRDEKAEFLHFGRRALLDSRHGNLVSGLMRSYPNLARRLGL---------------- 239
            |..|.|     |.|...:.|.::..||.:   |..:.|....:.||:.:                
  Rat   196 ALDIIC-----ETAMGKNIGAQSNGDSEY---VRTVYRMSDMIYRRMKMPWFWFDLWYLMFKEGR 252

  Fly   240 --CRNTAQIQEFYQRIVKETVTLREKE-------------NIKRNDFMDMLIGLKNQKNMTLENG 289
              .:....:..|...::.|.|..|:.|             ..||..|:|:|:.:.:::...|.: 
  Rat   253 DHKKGLKSLHTFTNNVIAERVNARKAEQDCIGAGRGPLPSKTKRKAFLDLLLSVTDEEGNKLSH- 316

  Fly   290 EVVKGLTMDEIVAQAFVFFIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVLEQHDQKFTYE 354
                    ::|..:...|...|.||:::.:.::||.|..||.:|.||..||..|..:..:..|.|
  Rat   317 --------EDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGRSHRPVTLE 373

  Fly   355 CIKDLKYLDQVINETLRHYTIVPNVDRVAAKRFVVPGNPKFVIEAGQSVIIPSSAIHHDPSIYPE 419
            .:|.|||||.||.||||.:..||...|..::...|.|   :.|..|...:|...|:|.||..:|:
  Rat   374 DLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAG---YKISKGTEAVIIPYALHRDPRYFPD 435

  Fly   420 PNEFRPERFSPEESAKRPSVAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNF 472
            |.||:||||.||.|..|...|::||..|||||||.:|..|:.:..||.:::.|
  Rat   436 PEEFQPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a18NP_651563.1 CYP6-like 70..500 CDD:410679 119/440 (27%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 121/452 (27%)

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