DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a18 and Cyp4b1

DIOPT Version :9

Sequence 1:NP_001287562.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus


Alignment Length:541 Identity:130/541 - (24%)
Similarity:222/541 - (41%) Gaps:104/541 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VALLAIVTYILHRKLTYFKRRGIPYDKPHPLRGNMEGYKKTRTVHEI---HQEYYNKYRNSKAPF 73
            |.:|.:.:.:|.|:.........|....|.|.|:....:|..::.::   .|::.:.:......|
  Rat    24 VIVLKLFSLLLRRQKLARAMDSFPGPPTHWLFGHALEIQKLGSLDKVVSWAQQFPHAHPLWFGQF 88

  Fly    74 VGFYLFQKPAAFVIDLELAKQILIKNFSNFTDKGIYYNEKDDPMSAHLFN------------LDG 126
            |||....:|       :.||.:.               .:.||.:|.:::            |||
  Rat    89 VGFLNIYEP-------DYAKAVY---------------SRGDPKAADVYDFFLQWIGKGLLVLDG 131

  Fly   127 PQWRLLRSKLSSTFTSGKMKFMYPTVVSVAEEFMAVM---HEKVSENSILDVRDLVARFTVDVIG 188
            |:|...|..|:..|....:|   |.|...||....::   .:|.|||...|:...|....:|.:.
  Rat   132 PKWFQHRKLLTPGFHYDVLK---PYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLM 193

  Fly   189 TCAFGIKCNSL--RDEKAEFLHFGRRALLDSR------HGNLVSGLMRSYPNLARRLGLCR---- 241
            .|.||...:.|  ||............|:..|      |.:.:..|.   |:..|.|..|:    
  Rat   194 KCTFGKGDSGLGHRDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLT---PHGRRFLRACKIAHD 255

  Fly   242 --------NTAQIQEFYQRIVKETVTLREKENIKRNDFMDMLIGLKNQKNMTLENGEVVKGLTMD 298
                    ..|.:|:     .||...::::.::   ||:|:|:|::::..:.|.:.         
  Rat   256 HTDEVIRQRKAALQD-----EKERKKIQQRRHL---DFLDILLGVRDESGIKLSDA--------- 303

  Fly   299 EIVAQAFVFFIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVLEQHDQKFTYECIKDLKYLD 363
            |:.|:...|...|.||::|.:.:.||.:|..|..|...|.|:..:|...| .|.::.:..:.||.
  Rat   304 ELRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQLCREEVRGILGDQD-SFQWDDLAKMTYLT 367

  Fly   364 QVINETLRHYTIVPNVDRVAAKRFV-VPGNPKFVIEAGQSVIIPSSAIHHDPSIYPEPNEFRPER 427
            ..:.|..|.|..||.|.|...|... |.|..   :.||..:.:...|:|.:.:::|:|..|.|.|
  Rat   368 MCMKECFRLYPPVPQVYRQLNKPVTFVDGRS---LPAGSLISLHIYALHRNSTVWPDPEVFDPLR 429

  Fly   428 FSPEESAKRPSVAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNFTFSPCSATPDPLTFDPHS-- 490
            ||||.:|.|...|::||..|||||||.:|...:.::..|:.:..|.||          .||..  
  Rat   430 FSPENAAGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFS----------LDPSKMP 484

  Fly   491 ----AILLGIKGGIQLKVEAI 507
                .::|..|.||.|.::.:
  Rat   485 IKVPQLILRSKNGIHLYLKPL 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a18NP_001287562.1 p450 38..504 CDD:278495 125/510 (25%)
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 125/511 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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