DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a18 and Cyp4a12b

DIOPT Version :9

Sequence 1:NP_001287562.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus


Alignment Length:551 Identity:139/551 - (25%)
Similarity:221/551 - (40%) Gaps:112/551 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQLTYFLFQVAVALLAIVTYILHRKLTYFKRRGIPYDKPHPLRGNMEGYKKTRTVHEI-----HQ 60
            :.|...||:.|       ...|||:......:..|....|.|.|           |:|     .|
Mouse    25 LSLLLLLFKTA-------QLYLHRQWLLSSTQQFPSPPSHWLFG-----------HKILKDQDLQ 71

  Fly    61 EYYNKYRNSKAPFVGFYLFQKPAAFVIDLELAKQILIKNFSNFTDKGIYYNEKDDPMSAH----- 120
            :...:.:|..:....:....|....|.|.:..|.||               .:.|| .||     
Mouse    72 DILTRIKNFPSACPQWLWGSKVRIQVYDPDYMKLIL---------------GRSDP-KAHGSYRF 120

  Fly   121 --------LFNLDGPQWRLLRSKLSSTFTSGKMKFMYPTVVSVAEEFMA----VMHEK----VSE 169
                    |..|||..|...|..|:..|        :..::....|.||    ||.:|    |.:
Mouse   121 LAPWIGRGLLLLDGQTWFQHRRMLTPAF--------HYDILKPYTEIMADSVHVMLDKWEQIVGQ 177

  Fly   170 NSILDVRDLVARFTVDVIGTCAFGIKCNSLRDEKAEF----------LHFGRRALLDSRHGNLVS 224
            :|.|::...:...|:|.|..|||..:.:...|.|.:.          |.|.|  :.:..|.|.:.
Mouse   178 DSTLEIFQHITLMTLDTIMKCAFSHEGSVQLDRKYKSYIQAVEDLNNLFFLR--VRNIFHQNDII 240

  Fly   225 GLMRSYPNLARRLGLCR----NTAQIQEFYQRIVKETVTLREKENIKRNDFMDMLIGLKNQKNMT 285
            ..:.|...||.  ..|:    :|.|:.:..:..:::...|.:.:..:|.||:|:|:..:      
Mouse   241 YRVSSNGCLAN--SACQLAHDHTDQVIKSRRSQLQDEEELEKLKKKRRLDFLDILLFAR------ 297

  Fly   286 LENGEVVKGLTMDEIVAQAFVFFIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVLEQHDQK 350
            :|||   |.|:..::.|:...|...|.||::|.:.:..|.||.||..|.:.|.|: |.|......
Mouse   298 MENG---KSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEI-QSLLGDGAS 358

  Fly   351 FTYECIKDLKYLDQVINETLRHYTIVPNVDRVAAKRFVVPGN---PKFVIEAGQSVIIPSSAIHH 412
            .|:..:..:.|....|.|.||.|..||:|.|..:.....|..   ||     |..|::....:||
Mouse   359 ITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPK-----GIHVMLSFYGLHH 418

  Fly   413 DPSIYPEPNEFRPERFSPEESAKRPSVAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNFTFSPC 477
            :|:::|.|..|.|.||:|..|  |.|.::|||..|.|||||.:|...:.::.:|:.:..|     
Mouse   419 NPTVWPNPEVFDPSRFAPGSS--RHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRF----- 476

  Fly   478 SATPDPLTFD-PHSAILLGIKGGIQLKVEAI 507
            ...|||.... |...|:|..|.||.|.::.:
Mouse   477 ELLPDPTRVPIPIPRIVLKSKNGIHLHLKKL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a18NP_001287562.1 p450 38..504 CDD:278495 131/509 (26%)
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 125/482 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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