DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side and side-VIII

DIOPT Version :9

Sequence 1:NP_001247334.1 Gene:side / 43300 FlyBaseID:FBgn0016061 Length:986 Species:Drosophila melanogaster
Sequence 2:NP_001097382.2 Gene:side-VIII / 37310 FlyBaseID:FBgn0086604 Length:1201 Species:Drosophila melanogaster


Alignment Length:1006 Identity:261/1006 - (25%)
Similarity:408/1006 - (40%) Gaps:227/1006 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TLVLLTCLQQLKSVSAD---------EESQDFQKNI------------PARLVWAALGKTVELPC 112
            :|.|..||..|.:::..         ..|....:||            |..|..:.:|....|||
  Fly     8 SLFLPLCLLVLSALNGPAAAASRVRVSSSTTMTRNIEEENALLLLLAGPPVLSESIMGTVGRLPC 72

  Fly   113 DLTPPTSQDSVKLLLWFKDTTGIPLYSLDSRGGNVKLAPHAAIASD--LGQRLFFSIGDNPKDSR 175
            ::|||..:|.|.|::|:|.....|:||:|:|..|.....|   .||  ..:||.|.:  ..:...
  Fly    73 NVTPPIYEDRVALVIWYKVGLKTPIYSVDTRDSNFAQGTH---WSDETYRERLSFHV--EGRAGT 132

  Fly   176 LQINDVKPEDGGVYRCRVDFFNSPTRNFRHNLTLVVPPEEPRIFDAQGKEI-SQMAGPFREGYEL 239
            |.|.....:|.|.|||||||..|||||.:.|||:::|||...|.|::|..| ....||:.||..:
  Fly   133 LTIKSTTEDDTGEYRCRVDFQKSPTRNSKVNLTVIIPPESVIILDSKGVTIEDHTLGPYNEGSGI 197

  Fly   240 FLCCQVRGGRPPPKVTWWRDDTELIGTSHTSVEEGATV--------MVNQLLIGTTTRDFYGIRI 296
            .:.|...||||.|:|||...:|         |.:.|:|        :.|.|.:....|....:::
  Fly   198 NITCVAIGGRPQPRVTWLHGNT---------VYKNASVGQPLSERRVGNTLSLARLERRNLHMQL 253

  Fly   297 ECRAQGTRLVDPVRKDVTVQVYLKPVRVKIATPNELLTAGQPMPIRCESWGSYPAAKITWLLDGE 361
            .|||:...|..|:...|.:.:.|:|:.||:...|..|:||....:.|...|:.||..|||.....
  Fly   254 TCRAENNNLTTPIISSVVLDMNLRPLIVKLQGENRALSAGNSYQLSCVVIGARPAPTITWWKGST 318

  Fly   362 PIRNA-EVTVHSDKEDGNITTSILTLKVTSENDNAELTCRATNPWFSGGAIEDKRIIRVAYPPTV 425
            |::|. |:..    .|||:|||:||...|.::....|:|||.........:||...:.:.:.|.|
  Fly   319 PMKNTHEIAT----PDGNLTTSVLTFTPTIDDRGKFLSCRAEQSMIPESGMEDGWKLDIYHIPVV 379

  Fly   426 SVHLANEDPSRLVTRAEGQNVTFKCRADARPPVTSYSWFKNGMRMSGE-------STEIMHLTQL 483
            |:.|...  |...|..||.:|.|:|...:.|.:...||..||..::..       |.:.:.|...
  Fly   380 SLELGTN--SLNSTLREGIDVFFECNIKSNPWIYEVSWRHNGKILTNNPAEGIAVSNQSLVLQNA 442

  Fly   484 ERESAGAYACGATNTEGETRSSSLTLKVQFSPRCK--------SGTEQTSIGAVSLHSILVKCEV 540
            .|..:|.|.|..:|.||:..|:.:.|.::|:|.|:        ||..:|         :.|.||:
  Fly   443 SRARSGIYTCVGSNREGDGESNPVQLDIRFAPVCRPRQRLSYSSGRHET---------VKVACEI 498

  Fly   541 DADPPDSVRFSWTYNNTRNVS-PVLNSRIQSNGLASTVTYLPQTDSELITLACWASNAVGRQTTP 604
            ||:|.::. :.|.:|.|:..: .:..|::..:...|...|.|.|:::..||.|||:|.:|.|:.|
  Fly   499 DANPAEAT-YVWKFNATQGETVDIPASQVAVDRGRSIAHYTPMTENDYGTLLCWATNEIGDQSEP 562

  Fly   605 CLVHILPANTPEAPKACELRNDTV--LEVVCVAGSDGGLSQYFMLEVVGGDPLYSGDPGGSAGQG 667
            |:..|.||..|:....|.:.|.|.  .::.|:.|.:|||.|.|::||.                 
  Fly   563 CVYTIFPAGEPDPLLNCTVLNQTSTGFQIECIEGFNGGLQQDFIMEVY----------------- 610

  Fly   668 RGQFSEAIGLGDNEISTLNDQATSAPIFRMQENSPQFRLNNLEPGREYQFLVYAVNAKGRSEPPV 732
                             :|.......|.:.:.  |.|.::.|.||..|...:.|.|:||||...:
  Fly   611 -----------------MNGTTRHPKISKSKR--PYFEVSGLVPGMGYNVFLIANNSKGRSNATI 656

  Fly   733 VIENVRVAAQLGPYDESI--------------LSEDPTPAETTHHGGGGVGGSGSSSGLGTGAS- 782
                ::|.....|..:::              .::....|.||   ...|........||.|.| 
  Fly   657 ----LQVYTLKDPEKQTVKITFTKSFQGLRPAYTKTKATATTT---SDCVCDEDEFLNLGKGISH 714

  Fly   783 -TGSGPEKQSTLLILAAVVV--------IGAVVVTSIIVAGIVVVCRHRPRPPEPQEVRKSMRPA 838
             .|:..::|..|.:..|.|:        |.|.:|.||.:..:::|...|        ||.|....
  Fly   715 DEGTDADQQEDLSLAYAPVIEDIRPFLGILAGIVGSIFLVALIIVIVVR--------VRGSSGRD 771

  Fly   839 RNDVPSMYIEEDELNELEEGGGRAADIRARVAPPNSHLCGGGGMPMPGGVG-------------- 889
            ||            |....|.|............|....||||    ||||              
  Fly   772 RN------------NYSHPGSGVGGVGGVGGTTGNGSGMGGGG----GGVGGTTANGNGSLGLLA 820

  Fly   890 --SSGGAIVGVAGPHHYISESFIQYAQPSLNGDVLLPLLVTSSQPCSTNSTISSVVLAMPQAKLC 952
              ::|..::|..| |:              .|..:..:.....:.|...|::.|:          
  Fly   821 SNNNGSLVIGTLG-HN--------------GGQSVQDMHRIGRETCHVTSSLDSI---------- 860

  Fly   953 PDPASRNTAWPPEYPDLILPRG---ELEFTT 980
                .:|       ||:|...|   :.|:||
  Fly   861 ----DKN-------PDIIPQDGHDLDDEWTT 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sideNP_001247334.1 V-set 95..211 CDD:284989 46/129 (36%)
IG_like 100..211 CDD:214653 43/112 (38%)
Ig 235..301 CDD:299845 20/73 (27%)
Ig 326..408 CDD:299845 27/82 (33%)
IG_like 329..407 CDD:214653 27/78 (35%)
IG_like 435..511 CDD:214653 23/82 (28%)
Ig_2 442..511 CDD:290606 21/75 (28%)
FN3 <700..735 CDD:238020 12/34 (35%)
side-VIIINP_001097382.2 Ig 55..166 CDD:299845 44/115 (38%)
IG_like 60..166 CDD:214653 42/110 (38%)
Ig 182..266 CDD:299845 25/92 (27%)
Ig 296..373 CDD:299845 25/80 (31%)
IG_like 389..464 CDD:214653 20/74 (27%)
IGc2 394..459 CDD:197706 17/64 (27%)
Ig_3 490..554 CDD:290638 20/73 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470115
Domainoid 1 1.000 43 1.000 Domainoid score I12361
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D23448at33392
OrthoFinder 1 1.000 - - FOG0002810
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
87.850

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