| Sequence 1: | NP_001247334.1 | Gene: | side / 43300 | FlyBaseID: | FBgn0016061 | Length: | 986 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001012201.1 | Gene: | Cadm1 / 363058 | RGDID: | 1310999 | Length: | 476 | Species: | Rattus norvegicus |
| Alignment Length: | 382 | Identity: | 88/382 - (23%) |
|---|---|---|---|
| Similarity: | 148/382 - (38%) | Gaps: | 82/382 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 235 EGYELFLCCQVRGG--------RPPPKVTWWRD-----DT--ELIGTSHTSVEEGATVMVNQLLI 284
Fly 285 GTTTRDFYGIRIECRAQGTRLVDPVRKD-VTVQVYLKPVRVKIATPNELLTAGQPMPIRCESWGS 348
Fly 349 YPAAKITWLLDGEPIR-NAEVTVHSDKEDGNITTSILTLKVTSENDNAELTCRATNPWFSGGAIE 412
Fly 413 DKRIIRVAYPPTVSVHLANEDPSRLVTRAEGQNVTFKCRADARPPVTSYSWFKNGMRM------S 471
Fly 472 GESTEIMHLTQLERESAGAYACGATNTEGETRSSSLTLKVQFSPRCKSGTEQTSIGAVSLHSILV 536
Fly 537 KCEVDADPPDSVRFSWTYNNTRNVSPVLNSRIQSNGLAST------VTYLPQTDSEL 587 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side | NP_001247334.1 | V-set | 95..211 | CDD:462230 | |
| Ig | 211..301 | CDD:472250 | 16/80 (20%) | ||
| Ig strand B | 239..243 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 253..257 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 281..285 | CDD:409353 | 0/3 (0%) | ||
| Ig strand F | 295..300 | CDD:409353 | 1/4 (25%) | ||
| Ig | 326..408 | CDD:472250 | 22/82 (27%) | ||
| Ig strand B | 339..343 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 353..357 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 384..388 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 396..401 | CDD:409353 | 1/4 (25%) | ||
| Ig_2 | 442..511 | CDD:464026 | 19/74 (26%) | ||
| FN3 | <700..735 | CDD:238020 | |||
| Cadm1 | NP_001012201.1 | IgV_1_Necl-2 | 50..143 | CDD:409465 | 19/97 (20%) |
| FR1 | 50..68 | CDD:409465 | 2/8 (25%) | ||
| Ig strand A | 50..52 | CDD:409465 | |||
| Ig strand A' | 53..59 | CDD:409465 | 88/382 (23%) | ||
| Ig strand B | 61..69 | CDD:409465 | 1/7 (14%) | ||
| CDR1 | 69..74 | CDD:409465 | 1/4 (25%) | ||
| FR2 | 75..82 | CDD:409465 | 0/6 (0%) | ||
| Ig strand C | 75..81 | CDD:409465 | 0/5 (0%) | ||
| CDR2 | 83..94 | CDD:409465 | 2/10 (20%) | ||
| Ig strand C' | 85..89 | CDD:409465 | 0/3 (0%) | ||
| Ig strand C' | 91..94 | CDD:409465 | 1/2 (50%) | ||
| FR3 | 95..130 | CDD:409465 | 8/48 (17%) | ||
| Ig strand D | 99..106 | CDD:409465 | 1/6 (17%) | ||
| Ig strand E | 109..115 | CDD:409465 | 1/9 (11%) | ||
| Ig strand F | 122..130 | CDD:409465 | 3/17 (18%) | ||
| CDR3 | 131..134 | CDD:409465 | 1/2 (50%) | ||
| Ig strand G | 134..143 | CDD:409465 | 1/8 (13%) | ||
| FR4 | 136..143 | CDD:409465 | 1/6 (17%) | ||
| IgI_2_Necl-2 | 144..242 | CDD:409466 | 25/101 (25%) | ||
| Ig strand A | 144..147 | CDD:409466 | 0/2 (0%) | ||
| Ig strand A' | 150..154 | CDD:409466 | 1/3 (33%) | ||
| Ig strand B | 163..173 | CDD:409466 | 1/9 (11%) | ||
| Ig strand C | 176..185 | CDD:409466 | 4/8 (50%) | ||
| Ig strand C' | 186..189 | CDD:409466 | 0/2 (0%) | ||
| Ig strand D | 191..198 | CDD:409466 | 2/6 (33%) | ||
| Ig strand E | 201..211 | CDD:409466 | 3/12 (25%) | ||
| Ig strand F | 219..227 | CDD:409466 | 1/7 (14%) | ||
| Ig strand G | 234..241 | CDD:409466 | 1/6 (17%) | ||
| IG_like | 255..333 | CDD:214653 | 22/82 (27%) | ||
| Ig strand B | 266..270 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 279..284 | CDD:409353 | 0/4 (0%) | ||
| Ig strand F | 313..318 | CDD:409353 | 2/4 (50%) | ||
| 4.1m | 429..447 | CDD:128590 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||