DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42534 and mib1

DIOPT Version :9

Sequence 1:NP_651560.2 Gene:CG42534 / 43298 FlyBaseID:FBgn0260487 Length:1555 Species:Drosophila melanogaster
Sequence 2:XP_009295119.1 Gene:mib1 / 352910 ZFINID:ZDB-GENE-030404-2 Length:1041 Species:Danio rerio


Alignment Length:691 Identity:152/691 - (21%)
Similarity:242/691 - (35%) Gaps:195/691 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QQRQEAADKVIAMPGSSQDTDAAAEAAVDVPE----TDPDPAQLTVSQSQSSSTVARRRLAEGCT 125
            ||....:|..:.:.|:|...:.||...| .|.    |:...|.||.|.|     |...||::...
Zfish   373 QQIYSDSDLKVEVCGTSWTYNPAAVTKV-APAGSAVTNASGAVLTESPS-----VPAERLSQLLK 431

  Fly   126 SLMYACQRGDIVQVLAQMREKPELLRQRDRSHRNALHYCAAQDSEGSKDLVAAASIAIAAPELLE 190
            .|....:.|||.:.|.:.....:|.:..|                                 :|:
Zfish   432 KLFETQESGDINEELVKAAANGDLAKVED---------------------------------ILK 463

  Fly   191 SADED------GFTPLHLAVIQGNLAMVNLLLANKADVNAVDNEGHSVVHWATVCGEVESLRAVL 249
            ..|.|      |.|.:..|...|::.::.|||.:..|:.|.|.:|...||.|:...|...:..:.
Zfish   464 RPDVDVNGQCAGHTAMQAASQNGHVDVLKLLLKHSVDLEAEDKDGDRAVHHASFGDEGSVIEVLH 528

  Fly   250 AAGASVAKPDANGGTPLHYAAQMCGASKQDSKQQASSSNSSRLSLEILGILLS---HPQSSVDVQ 311
            ..||.:...:....||||.|.                   ::..|:::..||.   ||    .:|
Zfish   529 RGGADLNARNKRRQTPLHIAV-------------------NKGHLQVVKTLLDFGCHP----SLQ 570

  Fly   312 DKDGRQPLLWAASAGSAKAVIALVKAGARVESSDKDGLTALHCAGSRGHTECIDTLIGLCGAP-- 374
            |.:|..||..|.|......:..|::|||.|..::.:|..|||.|..||:...:..|:.....|  
Zfish   571 DSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWI 635

  Fly   375 TDLIDSNGCTALHYAVTLGHADATARLLDLEADPNR--QDRKGRTPAHCGCSKGQFETLKLLKER 437
            .|....:|.||||.|....|.: .|.||..:.:.|.  |:...:|..|....:...:.::||...
Zfish   636 VDEKKDDGYTALHLAALNNHVE-VAELLVHQGNANLDVQNVNQQTALHLAVERQHTQIVRLLVRA 699

  Fly   438 GANLWLRNAKGDLPLHEAAASGRRELLEWLLAQRPKQVNTTSNDGRSLLHIAAANDYTDMCKLLL 502
            .|.|.:::..||.|||||...                        .:|..:....|..|:.|:  
Zfish   700 EAKLDVQDKDGDTPLHEALRH------------------------HTLSQLRQLQDMQDVSKV-- 738

  Fly   503 DYGADVNAVYRNSRGLVLTPL--DGALQRGHRSTAKFLQANGGQPANKVRLSSRRTGNPFHETNA 565
                   ..:..|:..::..|  .||.::...|.|.||.|||..    :.:.:::..:|......
Zfish   739 -------EPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGAD----LTIRNKKGQSPLDLCPD 792

  Fly   566 TDMVRPLKYVEKEELHDLRSSKKYVVYLKRSDSDNGN----------ENGKADVGDGDC----SC 616
            ..:.:.|....||:......|        ||.|.|.|          .:.|.|...|.|    :|
Zfish   793 PSLCKALAKCHKEKTSGQVGS--------RSPSLNSNNETLEECMVCSDMKRDTLFGPCGHIATC 849

  Fly   617 SEQTYRKEQRLRHVCRRHKRRQLRRRTS-----SCGESK----HERCSEICRSKSNIEIRRRKSR 672
            |..:.|.::.|  :|    :.|::.||.     .|.:.|    .:.|..:|              
Zfish   850 SLCSPRVKKCL--IC----KEQVQSRTKIEECVVCSDKKAAVLFQPCGHMC-------------- 894

  Fly   673 ERYASSSEWEEESAEDSCENC------CYHKRQKDRVVNRK 707
                            :||||      |...|   .||.|:
Zfish   895 ----------------ACENCASLMKKCVQCR---AVVERR 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42534NP_651560.2 Ank_2 127..226 CDD:289560 19/104 (18%)
ANK 193..335 CDD:238125 36/150 (24%)
ANK repeat 195..226 CDD:293786 10/36 (28%)
Ank_5 214..269 CDD:290568 17/54 (31%)
ANK repeat 228..259 CDD:293786 7/30 (23%)
ANK repeat 314..345 CDD:293786 10/30 (33%)
Ank_2 319..412 CDD:289560 29/96 (30%)
ANK 345..468 CDD:238125 35/126 (28%)
ANK repeat 347..379 CDD:293786 10/33 (30%)
ANK repeat 381..412 CDD:293786 11/32 (34%)
ANK 409..538 CDD:238125 25/132 (19%)
ANK repeat 414..479 CDD:293786 13/64 (20%)
ANK repeat 419..445 CDD:293786 5/25 (20%)
Ank_2 420..511 CDD:289560 16/90 (18%)
ANK repeat 481..511 CDD:293786 4/29 (14%)
Ank_2 486..>545 CDD:289560 14/60 (23%)
ANK repeat 516..542 CDD:293786 8/27 (30%)
mib1XP_009295119.1 MIB_HERC2 15..71 CDD:284184
ZZ_Mind_bomb 83..127 CDD:239079
MIB_HERC2 154..218 CDD:284184
Ank_2 446..571 CDD:289560 33/180 (18%)
ANK repeat 475..538 CDD:293786 17/62 (27%)
ANK 475..503 CDD:197603 8/27 (30%)
ANK 535..663 CDD:238125 41/151 (27%)
ANK repeat 540..571 CDD:293786 10/53 (19%)
Ank_2 545..637 CDD:289560 29/114 (25%)
ANK repeat 573..604 CDD:293786 10/30 (33%)
ANK repeat 606..640 CDD:293786 10/33 (30%)
Ank_2 611..707 CDD:289560 26/96 (27%)
ANK 637..790 CDD:238125 42/190 (22%)
ANK repeat 642..674 CDD:293786 11/32 (34%)
ANK repeat 676..707 CDD:293786 6/30 (20%)
Ank_2 681..780 CDD:289560 27/135 (20%)
zf-C3HC4_3 826..869 CDD:290631 10/48 (21%)
zf-C3HC4_3 871..916 CDD:290631 12/77 (16%)
zf-C3HC4_3 994..1037 CDD:290631
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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