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Protein Alignment CG42534 and invs

DIOPT Version :9

Sequence 1:	NP_651560.2	Gene:	CG42534 / 43298	FlyBaseID:	FBgn0260487	Length:	1555	Species:	Drosophila melanogaster
Sequence 2:	XP_005158096.1	Gene:	invs / 245946	ZFINID:	ZDB-GENE-020507-2	Length:	1026	Species:	Danio rerio

Alignment Length:	857	Identity:	200/857 - (23%)
Similarity:	309/857 - (36%)	Gaps:	248/857 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   153 RDRSHRNALHYCA-------------------AQDSEGSKDLVAAA------------SIAIAAP 186
            :||:.:.|||:.|                   ..||||...|..||            .|..|||
Zfish   139 QDRNKQTALHWSAFYNHPEHVKLLIKHDSNIGIPDSEGKIPLHWAAHNKHPNATRTVRCILEAAP 203

  Fly   187 --ELLESADEDGFTPLHLAVIQGNLAMVNLLLANK-ADVNAVDNEGHSVVHWATVCGEVESLRAV 248
              .||...|.:|.||||.||..||.|:|.:|.:.: ..|.|.||...:.:|||.:.|..:.:..:
Zfish   204 TESLLNWQDYEGRTPLHFAVADGNEAVVEVLTSYEGCSVTAYDNLFRTPLHWAALLGHAKIVHLL 268

  Fly   249 LAAGASVAKP-DANGGTPLHYAAQMCGASKQDSKQQASSSNSSRLSLEILGILLSHPQSSVDVQD 312
            |....|...| |:.|.|||||.||               ||.:    :.:.:.|.| .|..|..|
Zfish   269 LERNKSGMIPSDSQGATPLHYGAQ---------------SNYA----DTVAVFLKH-HSVRDEPD 313

  Fly   313 KDGRQPLLWAASAGSAKAVIAL--VKAGARVESSDKDGLTALHCAGSRGHTECI----------- 364
            .:||...:|||..||...:..:  :|....:..:||.|.||||.|...||...:
Zfish   314 LEGRTAFMWAAGKGSNDVIKIMLDLKKDIDINMTDKYGGTALHAAALSGHVSTVRLLLEQGGMVD 378

  Fly   365 -------------------DTLIGLC--GAPTDLIDSNGCTALHYAVTLGHADATARLLDLEADP 408
                               |.::.|.  ||..||:|.:|.:|||:|...|:|:....|::....|
Zfish   379 PLDVMKHTPLFRACEMGHRDVILTLIKGGARVDLVDIDGHSALHWAALGGNAEVCEVLMENGISP 443

  Fly   409 NRQDRKGRTPAHCGCSKGQFETLKLLKERGANLWLRNAKGDLPLHEAAASGRRELLEWLLAQRPK 473
            |.||:.||||..|....|....:.||.:                |:|
Zfish   444 NLQDQAGRTPLQCAAYAGYINCMALLIQ----------------HDA------------------ 474

  Fly   474 QVNTTSNDGRSLLHIAAANDYTDMCKLLLDYGADVNAVYRNSRGLVLTPLDGALQRGHRSTAKFL 538
            ..|....:||:.||.:..|.|.|..||||..||..|.:......  .||||.||...|:...:||
Zfish   475 DPNIQDKEGRTALHWSCNNGYLDAVKLLLGCGAFPNHMEHTEER--YTPLDYALLGEHQELTQFL 537

  Fly   539 QANGGQPANKVRLSSRRTGNPFHETNATDMVRPLKYVEKEELHDLRSSKKYVVY----LKRSDSD 599
            ..:|.                               :....:.|:.:|....:|    ::|:..:
Zfish   538 LEHGA-------------------------------LSIAAIQDIAASSIQALYKGYKVRRAFRE 571

  Fly   600 NGNENGKADVGDGDCSCSEQTYRKEQRLRHVCRRHKRRQLRRRTSSCGESKHERCSEICRSKSNI 664
                                  ||:..:||       .|||:..:...|.:..|     .::..:
Zfish   572 ----------------------RKKLLMRH-------EQLRKDAAKKREEERRR-----EAEQQL 602

  Fly   665 EIRRRKSRERYASSSEWEEESAEDSCENCCYHKRQKDRVV----NRKRSTSSRKSKNRDSSDPDE 725
            .:.....::|...::...|:.:.|..|     :|.||.|.    ..|:|:|:..|::|
Zfish   603 SLAEAGQKQRVLLAAVGVEKLSLDEAE-----QRFKDSVAAKGHKHKKSSSAHNSQSR------- 655

  Fly   726 KNHSENHSSPEKGSRKPLAVNGDHQADNGKDQTSTKERPP--SASRHQTPPTKEGTFIKSPTQSA 788
               .|..|..|:.:|:|          ...|..|.:..||  ..|..:.|.|:|...::
Zfish   656 ---REKPSRAERRTREP----------ETSDAPSIRSLPPVTPMSTKKCPVTREEVCVR------ 701

  Fly   789 KSEKSGQMDNLLVEESHAVE----LTDEEQEAAKSVVTQVDVHHDAEEIQTSKSSEEAPQAEENG 849
              |..|....:.:....|.|    .......:||.|.|  ..|.....::|:.:.:..| :....
Zfish   702 --ETFGPDTGISLNCGSANERRSPAGSSRPGSAKPVHT--GAHVAPGHMETTPTPKPRP-STTGA 761

  Fly   850 KEKESEQEVKLQLSEEETQLVSKEVEQVIIIAATALSSESKSS---SEEKSVEKEL--PKEGQAP 909
            ..|.:.|:..   ...|||.:||..:.:.....|.....:.:|   .:||..|||.  .|:.::.
Zfish   762 HSKNASQDTP---QHNETQTMSKGNKPISEHKPTGSQPSNNTSVTRQKEKRQEKETHREKDKRSR 823

  Fly   910 GENHDEEVKEHQ 921
            .|...:.|:|.|
Zfish   824 TEGDKQTVREKQ 835

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.