DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42534 and Ankrd54

DIOPT Version :9

Sequence 1:NP_651560.2 Gene:CG42534 / 43298 FlyBaseID:FBgn0260487 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_001365917.1 Gene:Ankrd54 / 223690 MGIID:2444209 Length:307 Species:Mus musculus


Alignment Length:358 Identity:80/358 - (22%)
Similarity:121/358 - (33%) Gaps:136/358 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 SSQDTDAAAEAAVDVPETDPDP----------AQLTVSQSQSSSTVARRRLAEGCTSLMYACQRG 134
            ||.|.:.|..         |:|          |...||.. |.:.:..|.:....:||.|     
Mouse    17 SSSDGECAVA---------PEPLAEAGGLVSFADFGVSLG-SGAGLPGRSVGRAQSSLRY----- 66

  Fly   135 DIVQVLAQMREKP--EL--------LRQRDRSHRNALHYCAAQDSEGSKDLVAAASIAIAAPELL 189
              :|||.|...:|  ||        ||:..|.||.               |........|...|.
Mouse    67 --LQVLWQQDVEPRDELRCKIPAGRLRRAARPHRR---------------LGPTGKEVHALKRLR 114

  Fly   190 ESADEDGFTPLHLAVIQGNLAMVNLLLANKADVNAVDNEGHSVVHWATVCGEVESLRAVLAAGAS 254
            :||:.:            ::..|..||.:.||..|.|::|.:.:|:|:..|..:.::.:|..||.
Mouse   115 DSANAN------------DVETVQQLLEDGADPCAADDKGRTALHFASCNGNDQIVQLLLDHGAD 167

  Fly   255 VAKPDANGGTPLHYAAQMCGASKQDSKQQASSSNSSRLSLEILGILLSHPQSSVDVQDKDGRQPL 319
            ..:.|..|.||||.||  |                                              
Mouse   168 PNQQDGLGNTPLHLAA--C---------------------------------------------- 184

  Fly   320 LWAASAGSAKAVIALVKAGARVESSDKDGLTALHCAGSR------GHTECIDTL---IGLCGAPT 375
                 ......:..|::.||||::.|:.|.|.||.|.|:      ||::|::.:   :....|||
Mouse   185 -----TNHVPVITTLLRGGARVDALDRAGRTPLHLAKSKLNILQEGHSQCLEAVRLEVKQPAAPT 244

  Fly   376 DLIDSNGCTALH----YAVTLGHADATARLLDL 404
            ..      ..:|    |...||..:...||.||
Mouse   245 SF------QIIHMLREYLERLGRHEQRERLDDL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42534NP_651560.2 Ank_2 127..226 CDD:289560 25/108 (23%)
ANK 193..335 CDD:238125 23/141 (16%)
ANK repeat 195..226 CDD:293786 6/30 (20%)
Ank_5 214..269 CDD:290568 19/54 (35%)
ANK repeat 228..259 CDD:293786 7/30 (23%)
ANK repeat 314..345 CDD:293786 5/30 (17%)
Ank_2 319..412 CDD:289560 26/99 (26%)
ANK 345..468 CDD:238125 21/73 (29%)
ANK repeat 347..379 CDD:293786 12/40 (30%)
ANK repeat 381..412 CDD:293786 8/28 (29%)
ANK 409..538 CDD:238125
ANK repeat 414..479 CDD:293786
ANK repeat 419..445 CDD:293786
Ank_2 420..511 CDD:289560
ANK repeat 481..511 CDD:293786
Ank_2 486..>545 CDD:289560
ANK repeat 516..542 CDD:293786
Ankrd54NP_001365917.1 Ank_2 117..205 CDD:403870 29/152 (19%)
ANK repeat 141..172 CDD:293786 7/30 (23%)
ANK repeat 174..205 CDD:293786 13/83 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.