DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42534 and cdkn2d

DIOPT Version :9

Sequence 1:NP_651560.2 Gene:CG42534 / 43298 FlyBaseID:FBgn0260487 Length:1555 Species:Drosophila melanogaster
Sequence 2:XP_002662282.2 Gene:cdkn2d / 100333252 ZFINID:ZDB-GENE-110316-1 Length:154 Species:Danio rerio


Alignment Length:124 Identity:44/124 - (35%)
Similarity:66/124 - (53%) Gaps:4/124 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 DGL---TALHCAGSRGHTECIDTLIGLCGAPTDLIDSNGCTALHYAVTLGHADATARLLDLEADP 408
            |||   .:|..|.::|....:..::.......|.::..|.|||. .:.:|.:...|.|||..|||
Zfish     5 DGLGCGKSLSAAAAQGDARAVRRILQDHRVEPDALNEFGKTALQ-VMMMGSSAVAAVLLDFGADP 68

  Fly   409 NRQDRKGRTPAHCGCSKGQFETLKLLKERGANLWLRNAKGDLPLHEAAASGRRELLEWL 467
            |.|||.|.||||.....|..|||::|.:.||::.:.:..|.||||.|...|..:::|:|
Zfish    69 NVQDRSGVTPAHDAARTGFLETLRVLVDGGASVNVPDHSGALPLHIAVREGHWDVVEYL 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42534NP_651560.2 Ank_2 127..226 CDD:289560
ANK 193..335 CDD:238125
ANK repeat 195..226 CDD:293786
Ank_5 214..269 CDD:290568
ANK repeat 228..259 CDD:293786
ANK repeat 314..345 CDD:293786
Ank_2 319..412 CDD:289560 20/67 (30%)
ANK 345..468 CDD:238125 44/124 (35%)
ANK repeat 347..379 CDD:293786 7/34 (21%)
ANK repeat 381..412 CDD:293786 13/30 (43%)
ANK 409..538 CDD:238125 25/59 (42%)
ANK repeat 414..479 CDD:293786 21/54 (39%)
ANK repeat 419..445 CDD:293786 9/25 (36%)
Ank_2 420..511 CDD:289560 17/48 (35%)
ANK repeat 481..511 CDD:293786
Ank_2 486..>545 CDD:289560
ANK repeat 516..542 CDD:293786
cdkn2dXP_002662282.2 ANK 27..127 CDD:238125 37/100 (37%)
Ank_2 27..105 CDD:289560 29/78 (37%)
ANK repeat 42..72 CDD:293786 13/30 (43%)
ANK repeat 74..105 CDD:293786 12/30 (40%)
Ank_4 75..127 CDD:290365 20/51 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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