Protein Alignment CG3339 and Dnhd1

DIOPT Version :9

• Sequence 1: NP_001036762.2
• Gene: CG3339 / 43295
• FlyBaseID: FBgn0039510
• Length: 4842
• Species: Drosophila melanogaster
• Sequence 2: XP_008758037.1
• Gene: Dnhd1 / 690115
• RGDID: 1584052
• Length: 4758
• Species: Rattus norvegicus
• Alignment Length: 5290
• Identity: 1029/5290 - (19%)
• Similarity: 1827/5290 - (34%)
• Gaps: 1510/5290 - (28%)

  Fly   436 SVLLRCICNMLVHRAAEDLELQLLFQGDADEGLLKINRTIAVLELFKQRMLDYKERYAGSQVLLP 500
            |.|..|.|:...|            ..|..|   |.....||:|..::.||         ::||.
  Rat    74 SGLAGCSCSGQEH------------SWDCQE---KQEHLKAVVESEQRNML---------ELLLS 114

  Fly   501 ALSEGAAAVASSPSPDDQQQLWRFCHEDVFG------QTLDGFSLQLLE-LRQVFEAAVQFQQLE 558
            .|....:||..    |...:.|.:.|. |.|      :.|.| .|:||. |.|::..|.:.|...
  Rat   115 ELKSLFSAVLQ----DGSCEAWHYLHA-VLGLLPPYREMLAG-QLELLPFLEQLYCWAPKVQAWL 173

  Fly   559 KLEVGGLRGKILTERVREIFGEFKVLFEQWSNVDIDLTATVASKW-KCFRR----EQTLFFSRM- 617
            :|:        |.:.:.:.|.....|....|:||       .|.| |.|.|    ....|....
  Rat   174 QLD--------LLDAIDKAFPPDSSLLHSSSHVD-------CSPWMKRFHRGPPCSACPFVKARW 223

  Fly   618 -QLLEQKLATVLLQAFEQCHSWMHLLRLTLMFGSLLQREAVRPELARVLPHILFIYDTEMEQLE- 680
             |..:::|||           |:..|.|              ||    |.|.|.|...|:...|
  Rat   224 DQQQKKELAT-----------WLRPLTL--------------PE----LQHCLGIVGAEVALEET 259

  Fly   681 ---DSVGEVLLGYEIRGLAALPLANNFPPIANAMMWLEQHISRCDEFGAKELSQLV----EQLLK 738
               ||:          .|..|.||.:.|     :.:....|...:...|....||.    |:.||
  Rat   260 PWLDSL----------SLLPLALATDIP-----VQYESSDIGHAEPAPAGRKPQLASEAPEKALK 309

  Fly   739 EKS-ELQTLPIQWNSLLSRRNILTTKLSNLQMKIWISWHECVDKLIIQGLDESVLSRSQDLSQLH 802
            .|| ....|..|..||| :.:....|:..|.:.:....|....||::...::        ::..|
  Rat   310 RKSPRTSILRSQVKSLL-KGDWSQKKIHFLYLNVASDRHFNPYKLVVVPPNK--------VNPEH 365

  Fly   803 LNFSQVLFTLL-------KETKYLLALQATGSLSGDLFQLPEPLLTLYGHRDAYWERRIRLIKIG 860
            ..||.  |.:|       .||..|.......:|..:|.::|.....|.......|::.:|
  Rat   366 YIFSP--FGILHIHPVEGSETMSLATWHRDTALWHELQRIPFFKNCLLRKALTCWKKNVR----- 423

  Fly   861 EFYNGIRSGECAAAELQLIRNDLASIDEHVEVACQQLTWRNYNDELVAGIFEQSRDLFARLQQSH 925
              :.|:.       .:|..      :..|:.:|.....         ||:.
  Rat   424 --FRGLH-------RIQTF------LKTHLLLAIPHFG---------AGML-------------- 450

  Fly   926 GNLDAILASMRRWS---REPLHQRSLYGRNLLDLRHQQDRVRLRLLQCDETKMLLNRLLIANFCL 987
             :::.:|...|..|   :||  .:|...|:|.....:::...||:|                 |.
  Rat   451 -HINRLLQEFRSVSWLPKEP--DKSYVLRDLKKAIAKENHRALRVL-----------------CH 495

  Fly   988 FFNYESQEFQL-----YSRDLSVQEFIREFPEEQRRQYNKYLASVDELICREVREAMRISLEYLY 1047
            |.|..:...||     |.....:||.::.:...::.|.:.||   ...:||.:.:.::.:..:|.
  Rat   496 FLNLCASILQLIHEDTYQMQQGLQERVQNWNRIRKSQGSIYL---QRTLCRHLEKKLKQAETWLS 557

  Fly  1048 KEMTATATATTTPTAPPVDPGCSAGM-ARLV-------LQQITTPQATSTAGAGASGAPPTANDA 1104
            |                      .|| |||:       |..|...:.||........  |..|.
  Rat   558 K----------------------LGMFARLIDYMICQNLVSILEDEITSFIANNLQA--PRQNP- 597

  Fly  1105 PLFEVKLELTETEIRFSPAFDASVENNFQQIVEQL------LLDIKQTCDCMPRIVADNAPSEDD 1163
              |.|...:.:...:.||.  ..||:..|.:::.|      .|.:.|:.|.  |...:...|||:
  Rat   598 --FLVSQLVFDDNGQLSPM--PRVESIIQSLIKSLQSIKTSALKVMQSTDL--RTSREPLYSEDN 656

  Fly  1164 EDDDTAT----------------------VDY----------------EQELRWE---PREDRAQ 1187
            :|.|:.|                      |.|                ...||.:   |..|..|
  Rat   657 KDQDSNTEFPMPKFHGKSSDAVRLFCGPNVGYVWPWKSHAITNVLEVRGHRLRGQYLHPNYDHVQ 721

  Fly  1188 ELQERKKKDLELEQEQGDPKPQAVQFNLL----AAAKAYSQKMECTADGLEMLERAIRDALADTV 1248
            |         :|::..|..:..|||..||    ...:.:..|.:...|..|.|:......|.|..
  Rat   722 E---------DLDKNAGIQQALAVQQALLEDMRQEVQEFCNKQQWVEDIYEFLKAWNSQKLEDLR 777

  Fly  1249 AAASAYAAKFQAYAFLWTQQSSEVLAACMQTAREQTHHVSAGGYAIMETFKKEIENYNEVHDAID 1313
            .:..:...|.......|.::.|.:....:    .:|..:...|..:.|..:.::.|..:  :.::
  Rat   778 GSPISDYVKLVRKLKNWQERVSNMPVELL----TKTKLLLLSGRDVQEELESKLNNLRK--NILE 836

  Fly  1314 QCENRECINGWLALDIKPLKYGLLNLACKWSHMCKKWLLRYVQGTLKELNAFIARGFETLQLHIA 1378
            |.:| ||                      ||..         |..:|:|..|: |.|:|:.|
  Rat   837 QVKN-EC----------------------WSRN---------QQLMKKLTEFL-RVFQTINL--- 865

  Fly  1379 RQDFATLLRVLAIMSEIREREPYADNVFKPLKEIMGLLKTYNVEF--EPQLLRGIEQLPQQWQQL 1441
              |...:.:....::|..|:..:.:...:.::.:..|::.:.|.|  |.:.|.  ..|...|:..
  Rat   866 --DIHAIAQCSQKLNEANEQYCHLEEQVEYVRSLHDLIRNHCVLFISENETLD--IALLDLWEAF 926

  Fly  1442 KHSSTVKQEALQDTRFH------QQQRVTALIGLHTCHLQHYARQFQKMPFFRVPCPQVYDVCDE 1500
            :...:...|.|...| |      ||....||..|....::..:..|......:....|.....:.
  Rat   927 QFERSQVSEFLLSKR-HAIVPKLQQLMAAALAELEGLLVKALSGPFMDPSQEQRSTEQQLGALEN 990

  Fly  1501 VYLR-LHRFRRQQRLYTRW-ARLLDIQPP----DPATLQFCEVELRRVKQLWDFVRVIESCIVAW 1559
            .:|. |..|......|..: .....:.||    .|..||         :::|...|:|......|
  Rat   991 QFLNTLSNFNALCYAYRSFTGHKTTMSPPASGNRPIVLQ---------QRIWRLYRIIHENFSEW 1046

  Fly  1560 HATPWLLIDTDDMEHECKKFTRDLRTLDKCIREWAPYV-HIVGVLRELVASLRAITELQNPAITE 1623
            ....:...:......:...:..:...|...:.:.:|.: ..:.:|.|..|.|..:.:|.:..:.:
  Rat  1047 KCVAFSKFNLSMAREKTNAWLTEAARLGTALGQQSPVLQRCMRMLEEFRAYLPLLIKLGSLELQD 1111

  Fly  1624 RHWMELMQLTKL-SYKCNKSTRLAQLLTLQLQHHEEDIKNTVDRAIKEMTVTKVLDEIKATWAHL 1687
            .:...|::...| ..:......|.:||...|....:.|.....|..:.:...::|.:::..|...
  Rat  1112 VNTQSLLRALGLGGLQSLDLLTLGRLLNCPLLEFADRINQVWQRDKERIHAQEILQQMQQYWEGR 1176

  Fly  1688 EFEL-------------EQHHTRPHIQ--------------LLKVSEELIETLDDNQMQLQNIST 1725
            :..|             .:...||.::              ||.....|.:.:.::...|..|..
  Rat  1177 QLRLLNFILQVPYRPPTSERSKRPALRSPQWELVGKDSGTFLLSDYSSLQDAIQNSLQALFKILA 1241

  Fly  1726 SKHIEYLLDKLTHWQKVLGGIDTLIVNWFEVQRKWIYLECIFIGSADIRAQLPADAAN--FERID 1788
            .:....|......|..::..:..|:..|...|:|||:|..:.   .::..:.||...|  |:.:|
  Rat  1242 IQKSGQLHKIALEWVTIMYDLGALLEVWVSFQQKWIFLNKVL---HEMEIEFPAAELNARFKVMD 1303

  Fly  1789 EDFTALLAKVQEVRVVMQVVLRHDDVLAQLL------------QLQHRLAVCE-------KALND 1834
            :.:          |.:|::.:....||:.::            .|||.|.|..       ..|.|
  Rat  1304 DQY----------RTLMRISVADPMVLSLIVPNTKRSPYFQGQHLQHLLKVGSVELEAIIMGLED 1358

  Fly  1835 YLETKRLAFPRFYFISAADLLDILSNGNNPQVIDRHLIKLFDSILRLQYETNTPNALGMHSKEND 1899
            .|...|..|||.:|:|.::|:.:|::..:.........:.|..|..:.:.:.:.|      |||:
  Rat  1359 VLYGVRANFPRLFFLSDSELVALLASPLDTSEAKPWAQRCFPYIKAVNFRSKSTN------KENN 1417

  Fly  1900 EYVPFVSFDPDQPAFI----------VCGGRVEL------------WLRAIIQQMRSTLHELFR- 1941
                    |.|..:.|          .||..|:|            ||.::...:|..:..|.:
  Rat  1418 --------DKDSKSSIETVETISVLGACGEEVKLQEPLPLYPDLPKWLASLETCLRLVVVNLLQS 1474

  Fly  1942 -------------RALRVFGEKPR---ELWLYDW-------PAQVALCCSQISWTADVNRSFGCM 1983
                         :||:...::.:   :|::..|       |.|..|...:|.|.|:       |
  Rat  1475 CVATRLAQGPSLIKALKAMPQQRQMSTQLYVQHWLDAVQVFPWQCILVAEEIVWRAE-------M 1532

  Fly  1984 EEG-YEGVMKELHKRQIAQLNALINLLLGELSPGDRQKIMTICTIDVHS---------RDVVGKI 2038
            ||. .|.....|....:..|..|:..:..:.|....|.:.::....:.|         ||:...:
  Rat  1533 EEALLESKTMRLSSVHVRNLEVLVQFIRSQRSSQGEQPLPSVRQTSLFSSLLVKAVTHRDIAQLL 1597

  Fly  2039 IASKVDNSLAFQWQSQLRHRWDDDQAGSSSGRASTAISC----GGGDED------CFANICDAEF 2093
            ..::|.:...|.|..|:::     ..|||.....:.:.|    ...:|.      |:.::....|
  Rat  1598 EKNQVSDLTDFHWVRQIKY-----HLGSSHLNLKSPLQCLTTTASTEEPSVSPAACWIDVLGRSF 1657

  Fly  2094 RYAYEYLGNTSRLVITPLTDRCYITLTQSLRLRLAGATAGPAGTGKTETTKDLGRALGVMVYVFN 2158
            .|.|||:|.....:.:.:.:|....|..:|.....||..|..|.||.||...|..|||..:.:..
  Rat  1658 LYNYEYMGPKLGPLPSLMHERQVFILLLALNEVAYGAVLGRDGLGKAETVNSLAWALGRQLVIMP 1722

  Fly  2159 CSEQMDYKSCGNIYKGLAQTGAWGCFDEFNRICVEVLSVVAVQVKTI--------QEAIK----M 2211
            |..|::::...|...|..|.|||...:..:::...:||.:..::..:        |:|.|    :
  Rat  1723 CLPQIEFRCLSNYLNGALQCGAWLLLENVHQLPSGLLSALGQRLDELHHLYAPLYQKASKNISTI 1787

  Fly  2212 HKTQFIFMG------ERISLEPSVGIFIT---MNPGYAGRTELPENLKTLFRPCAMIVPDFALIC 2267
            :.|:.:.:|      .::|:....|.|:|   ::|      ::|.||..|.||.|:..||...:.
  Rat  1788 NPTKHLLLGAGFFEKHQVSVRLGFGCFLTFHSLSP------DVPANLHLLLRPVALAFPDLQRVA 1846

  Fly  2268 EIMLMAEGFQDARLLARKFITLYTLCKELLSKQDHYDWG-----LRAIKSVLV-VAGTLKRDDHS 2326
            |:.|:..|.:||..:|.:...|::|.:||:|       |     |..:|.||. ...||...:.:
  Rat  1847 ELQLLGAGVRDASRMATRLSKLFSLERELVS-------GTLPSRLPLLKQVLENTIETLNASEEN 1904

  Fly  2327 R---------PEDQVLMRALRDFNIPKIVTED---VPIFMGLIGDLFP-ALDVPRKRVFE--FEK 2376
            :         .|:..|:|||  .:.|.....|   :.....|:..:|| |..|..:.|..  .:.
  Rat  1905 KSQQPHNLAAAEEAALLRAL--LHSPLFTILDGLRLQKLQELLCGIFPNASHVLAEPVCHRLMKS 1967

  Fly  2377 TIRRAVNEIKLQPEEGFLMKVVQLQELLDVRHSVFIVGNAGTGKTKIWQTLRETYRIQ-KLKPVC 2440
            .:...:.::.|.|....|..:.||.|.|.....:.::|.||:||:..|::|   ::|| :|..:.
  Rat  1968 VVVEELQQLGLFPTLNTLTSLEQLSEALSKASGILLLGTAGSGKSTCWKSL---FKIQNRLAAME 2029

  Fly  2441 HV------------LNPKALSNDELFGIVNPTTREWKDGLFSSIM-----------REQANMPPG 2482
            |.            |.|..|::.|..|....::  |:.|:|:.::           .|::....|
  Rat  2030 HTSTKGFQSVETVHLYPSVLTSQEYLGWSEGSS--WRYGIFTKLLHAAPYCKTVGSEEKSERFTG 2092

  Fly  2483 NPKWIVLDGDIDPMWIESLNTLMDDNKILTLASNERISLKREMRLLFEVGHLKAATPATVSRAGI 2547
            ..:||:.||..:..|::|:..|:.|...|:|.:.::|:.......|.||......:|..:.|..:
  Rat  2093 IQQWIICDGAPNHAWLDSITCLLADPPQLSLPNGQQIARPLGTFFLIEVAEAAGMSPTVLGRCAL 2157

  Fly  2548 LYINPQDLGWSPYVSSWL-----------ETRVDMIERGILNALFEKYFPCLMQRQRDFRRITPI 2601
            ::...:.. |...:|..:           ||.|.      .|.|.|...|.:      ||.:|.|
  Rat  2158 VWCCGEQT-WQSMLSVLITSLPHEYHLQQETIVQ------FNHLAEVLVPSV------FRFLTRI 2209

  Fly  2602 TDMAMIQMTCH---------------LLECLLD---------SDEGNADGRGR--------GSAT 2634
            ...:.:|:..|               :|..|||         ......|..|.        .|.:
  Rat  2210 GASSQLQVHGHQAVCPGVAEVTSLIRILRALLDPHLHLFEEEKPHTKEDFSGTDLVTQNFISSKS 2274

  Fly  2635 GGAANPHSLHHGELSHEAMVMALETIFVYATVWSFGSALSQDVIIDW--HREFHKWWIGEFKDI- 2696
            ...::..|::..|..|   ::|:.: |::|.:|.||:.||..   .|  ..:|.:..|....:.
  Rat  2275 KAQSDRISVYKKERRH---LLAISS-FLFAIIWGFGAHLSSR---HWPLFDDFMRKAISSLPNYP 2332

  Fly  2697 KLPSQGTVFDYQLNVQTLKFQPWSELAAHQSLEGQIDSETPLQNVLISTAETIRLAYFLKLLIDR 2761
            :.|....|||..:|::.....|::.......::..:.|..|       :::..:|.|.:.||:..
  Rat  2333 EPPPSALVFDLHINLEDGTLVPFTGQYLSTHVKRSLGSFQP-------SSQVEQLLYVVDLLLSN 2390

  Fly  2762 NLACMLVGNSGCGKGAIFRQLFGQYANDQELLEVAVSAATAGDSSHQQQSGNPAGAVVVRRKASS 2826
            ....:|.|....||.|              .:||.|            :..:|    .:.|
  Rat  2391 GQPVLLAGEIATGKSA--------------FVEVLV------------EPNHP----TIHR---- 2421

  Fly  2827 SATPLLTTVQATHFNFYTSSEIFQKMLDRPLEKKSGRCYAPS--GP----KRRLIYFVNDLNMPE 2885
               |:...:.:.|         .:.:|.|.:.   |:..|.|  ||    |..:::.:.||::..
  Rat  2422 ---PINPALNSAH---------LRNLLSRAVH---GQTQAGSFVGPHQDSKGSILFLMEDLHLAA 2471

  Fly  2886 VDAYGTVQP-HTIMRQFMDYRQWYDRQRLQLKDIRHCQ--FAACMNPTAGSFTIDPRLQRHFCVF 2947
            .|...:.|| ...:||.|: ...|....|:|:.::...  .|....|......:.|||.|.|.|.
  Rat  2472 FDPEKSCQPVLETLRQAME-GTIYSHNTLELQTLQPTVNFLATATVPGYSERPLCPRLYRLFTVL 2535

  Fly  2948 SVAPPGEDTLHHIYGSILSSHLES--------PSQGFTKEIRSIGSLLVRVGIALHRRVEYAFLP 3004
            ::....:|||       ||.|:.|        ||   .:...::...|||..:.....|...|:|
  Rat  2536 ALNSMTQDTL-------LSRHVPSIQAWLERFPS---VEREHTLARALVRASVEAWEAVCNCFMP 2590

  Fly  3005 TALKFHYLFNLRDLTGIYQGLMNSVGAPASAGGGG-------------ASGFGG---TICSRPSE 3053
            :.|..||.|:...::.|...|..   .|...|..|             .||..|   ||......
  Rat  2591 SPLHPHYRFSPHSVSHILGSLQL---LPTRMGSRGFVDSFHHQEHLRRVSGLRGTRLTIMMSMRV 2652

  Fly  3054 LMRLYVHEAFRVYHDRL------------------------------------------------ 3070
            ::||::|||.|.:.|||
  Rat  2653 MVRLWLHEAQRTFCDRLDSDRERSHCVKLLLEVAQRVFCSVPGSESLARVCEEEEVEEEKVPEVE 2717

  Fly  3071 ---------------------VDPYDIK----SFKSS-------IRDIFKKDFEDFDEDFVFAEP 3103
                                 .||:.::    ||.|.       |:.:.|::.|:
  Rat  2718 SEEEIAHWEILSNSDSGSEEEEDPFGLQATTGSFLSESGLAPLPIKSVNKENTEN---------- 2772

  Fly  3104 LIYSHFAQSLVD--------QKYMPLKSWDSLYQ-----------LLIEAQASYNEVVGYMNLVL 3149
              .|..||.|.|        |.....:.|....|           ||...|.:.:::|..:.|.|
  Rat  2773 --VSQVAQQLEDIRNSNSKLQSETHKRKWQRAPQTDLSLPLLLPVLLFYPQENPSDLVFSLELTL 2835

  Fly  3150 ---FEDAMI----------------------------------HVCRINRILESPRGNALLIG-V 3176
               ||...:                                  ||.|:.|:|..||.:.||:. .
  Rat  2836 GSNFESPNLYLERQWENLEKQLAASAVQLKMNSDFAQCHVMVQHVARLVRVLARPRQHGLLLSEF 2900

  Fly  3177 GGSGKQTLARLAAFISSLNVSQIQIKRGFGLLDMREE-----IGNLYMKVGLKNLASVFLISDAQ 3236
            .|:|:.|     |.|.:.|:.|.::   |.|....||     :.:.....|:.| .||.|:
  Rat  2901 RGTGRNT-----AIILASNICQARL---FHLPFESEEAVFQCLRDASWHAGVLN-QSVALL---- 2952

  Fly  3237 IPDESILMLINDLLA---SGEIPELFNDDQLDTITNGIRNE-------VKQSGTLD-----TKEN 3286
            :||:..:.....|||   ||..|:.:.:..||.|...:..|       :|:...|:     ...|
  Rat  2953 VPDQVNVATFCQLLALATSGSFPDQYTEADLDNIEEHLPKENLVNKYSIKKDTVLNRFYQQVCSN 3017

  Fly  3287 CWRYFV---EKVRRLLKVVLCFSPVGQTLRVRARKFPAIISRTAIDWFHEWPKSALESVSQ---- 3344
            ...:|:   ::|::.|...|..|.:..|:             .::|.:..|.:::|..|:|
  Rat  3018 LHMFFLMEDDQVQKQLPSTLFLSLLQLTI-------------ASVDRYEPWDQASLVRVAQFRLE 3069

  Fly  3345 --KFLNEINGILE----PALVPPIGCFMAYVHGTVNQISRIYLQNE-KRYNYTTPKTFLEYIFLY 3402
              :.|...:|.|:    ..|:|.:...||.:||:    |..|.|:. ......||:||.:::.::
  Rat  3070 NDQSLPLDDGSLKCPDFKILIPNVANIMARIHGS----SAYYHQHMCPALPLVTPRTFQDFLDMF 3130

  Fly  3403 RKLLVDKNGEFAERIARLQSGMSKLAECARQVDTLKHQLAIQEVQLAAKNAAADKLIVIVSAESE 3467
            .:.......:...|..|:||.:..|.....:..|....|...|.||    ..:.|.:.:...:.|
  Rat  3131 LQQQQQMVLQMRMRARRIQSALKTLRLLVERHSTQTSMLTDLEKQL----KGSYKNVGMYQGQLE 3191

  Fly  3468 KVKRERYIASEEEKRVRIIEEDVSIKTKMCE--------EDLRQAEPALVAAQAA---------- 3514
            :.|                   :..|.||.|        |:|.:...||.|.|.|
  Rat  3192 QCK-------------------ILYKQKMAECQHLESLIENLTRQHDALKAQQEAFLEQMGKAFV 3237

  Fly  3515 --LNTLNKNNLTELKSFGSPPKAVVNVCAAVMVLLASNGKIPRDRSWKASKLMMVRVDQFLNDLL 3577
              |:.|...:..|::|:.:||::||.|..|:..|      ...:..|.::|.::...| |..:|:
  Rat  3238 GPLSQLRVADFEEIRSYRAPPESVVKVTDALCDL------FHHETGWSSAKQLLCTED-FYQELV 3295

  Fly  3578 NYNKDNIHPNIIETLQEYLKDPEFNPDKVVQKSVAAAGLCAWVINLHRY--------------HQ 3628
            .:.|:.:..:.:..|.:.|:.|..:...:...|:.||.|..|:..:.||              .|
  Rat  3296 FFPKEKLMDSELAKLSQALRAPGMSDASLRSVSIPAANLAVWLRAVLRYGLAQRRGLPTGLLLRQ 3360

  Fly  3629 VFLIVGPKQQALQDSHQELLEARERLQYLKAKINNLEAKLAEIQAEFENAVGEKQRCQREADKTA 3693
            |...:..:|..|.....:..:..::.|:|..|:.  :|:|:      .|.|.|
  Rat  3361 VDATLAREQARLGQFQFQAHDLLQQTQFLTKKLE--DAQLS------HNHVVE------------ 3405

  Fly  3694 FTIDLA-----HR--LVNGLANENVRWKESVQSLLAKIGTLPGDILLISSFLSYVGCFTRRYREE 3751
             |::.|     ||  :.:.|......|...:|.|..:..|:.||.||.|:.:.|:|.|..:.|:|
  Rat  3406 -TLNQAQCGHFHRWPMKSALLTPMHMWTTQLQKLQEQAKTVFGDALLCSAAIVYLGPFPPQRRQE 3469

  Fly  3752 LQHKMWL---PNFRK-IDPH------------------IPHTEGVDTLALFSDDAQIAAWNNEGL 3794
            |..| ||   ..|.: :||.                  :|.......|.|.|..::...|:.:..
  Rat  3470 LLEK-WLSLCQGFEEALDPDDVAQALRQKSVRVSKNPLLPTRTPFRILTLLSCGSEQHQWDRDLK 3533

  Fly  3795 PMDRMSTENATILQ-----YSTRWPLMIDPQLQGIKWIKNRFGTDLVVLRLRQKGFLE------- 3847
            |..:.:.....:|:     .|:||||::||..|.|.|:.        .|..:|..:||
  Rat  3534 PQAKSARLLGLLLRSHIHFSSSRWPLLLDPSNQAIIWLN--------PLPPKQNKWLEQPPKESR 3590

  Fly  3848 ----------------ALEKSISQGDTVLIEQIEE------------------------------ 3866
                            .||...::.:..:.||.||
  Rat  3591 AKYHVTNQDSEDETEDELESENNEDEDEVSEQREEHKTEENESEEENKQEEQETEKENEAESTSS 3655

  Fly  3867 --------------SMDTVL---EPLLSRALIK----------KGRYLRIGDKEIEFHASFRLIL 3904
                          |..|||   :|.|...|::          ....|.:|.:|:::     |:.
  Rat  3656 GSSSSPPSETQCLPSYLTVLSGTDPELGPQLLEAAANGLPVLLTNMELSLGCQELQW-----LLS 3715

  Fly  3905 HTKMANPHYKP---------------------EMQAQTTLINFTVTPDGLEEQLLAEVVKIERPD 3948
            ...:..|:.:|                     |:.....:::..:..:.||||:|.|::..|||:
  Rat  3716 KKNLIPPYVQPGFCLFLSTTFPIHALDRVLGYELLKGLNVLDLGLNMEILEEQMLHEILCRERPE 3780

  Fly  3949 LEQMKTEVTVQQNKFKISLKALEDELLARLASSGENVLDDHALVINLENTKRTVDEIEAKVREAR 4013
            ||....::.|:..:...::||.|::||..|....:........:..:..|:..:.::.|:..|..
  Rat  3781 LETRWQDLKVRAAENYEAMKADEEQLLVILLRQNKMRQKPSRFLREMVRTQAKICQLNAQGEELD 3845

  Fly  4014 VTTLQIDDTRNIYRSAAKRAAILYFVLTDLSRINPIYKFSLKSFMNVFRQAIAMAAESKNYE--- 4075
            ...|::......||..|.....:...|:.|..:.|.:....::::.|.|:||.......:|.
  Rat  3846 EQKLEVAALWAPYRQVAYHGMAMVEALSSLQNLLPFFCMKSENWLAVIRRAIDSMKSCDSYHGED 3910

  Fly  4076 ------KRVLHLVESITLQT------YRYTLRGLFEADKLTFTSHMTLRILIAAEQVAKDETDFL 4128
                  :..:||...:.:.|      .:..|.|.|.|              :|..||.| :|..|
  Rat  3911 LPSHLLRMKIHLARQLLINTVVALGLIQTPLVGAFGA--------------LAMLQVTK-KTPKL 3960

  Fly  4129 LRFPHDPTTL-SPLD-------------FVGRSAWGGIKSLTLIEHFYGIDKDMENYTKRWRKFM 4179
            .|....|..| ||..             ::...||....:|.|:..|.|:...:.:::..|:.::
  Rat  3961 ERLALWPGLLASPSSGHNIQIPGVTRPAWLSSRAWEECGALELLSPFAGLRASLASHSDVWQDYL 4025

  Fly  4180 ASDTPEREQFPGEWKHRTPL---QKLCIIRSLRPDRMTYAMRQFVEQTMGRSYAE-IQTPPFGAI 4240
            :..:......||  .:..||   |||.:.|.||||.:..|:.......:||...| :..|..  |
  Rat  4026 SLSSTVLGPAPG--PNSEPLSLFQKLILWRVLRPDCLVGALADLTTSLLGRPLDEDLDAPTM--I 4086

  Fly  4241 FQELNAATPAFFILSP------GVDPIRDVERYGQRQGFHSESDTLVNISLGQGQELLAEQAIIG 4299
            |..:....|...:|.|      .:.|:..:.:....:   .....|..|:|| .::......::.
  Rat  4087 FDHIQPTQPILILLPPPGHPTATLHPVTVIRKLAASE---KPQKRLHVIALG-SEDWDPVSTVVN 4147

  Fly  4300 ALESGQ---QWVILQNIHLVVNW----LPTLEKLIE--RIVLQSE--SKGES--------NFRLF 4345
            .|....   .|::|.|.||:..|    |..|:.|::  ::|..||  ::.||        :|||:
  Rat  4148 TLSQAMLQGHWLVLDNCHLMPFWPRELLQPLQGLLDGAKVVSDSELIAEPESRTVATVHRDFRLW 4212

  Fly  4346 ISAEPAPDPQYHVIPQGILESSLKVVNEPPSGMAANLHKAWDNFSQDALETCTQEAEFKSILFAL 4410
            :.|.......   :|..:.:.|:.|.......:...|..:.|:..:.:.::.||       .|.|
  Rat  4213 LIASTEASTS---LPGVLTQHSMPVFWNQSLELGRILIDSVDSQQELSTQSFTQ-------TFPL 4267

  Fly  4411 CYFHAVAGERRKFGPQ------GWNKVYPFNIGDLTISSNV-LHNYLEGSNRIPWEDLRYLFGEI 4468
            .:.:.:...|:.:|.:      .|::|        |::..: :...|..|...|...|..|...:
  Rat  4268 FFLYGLLVHRQLYGLKLQAHRGRWSQV--------TLTRVLQIQEQLWASLSNPSAALLELAASV 4324

  Fly  4469 MYGGHITDDWDRRLCQTYLEELLQQDLIDGDFELCPGFPAPPNLDFEGYHSYITEMLPEESPLLY 4533
            :|||.:.|..||....:.....|.                |.|:::...|:      |:.  ||.
  Rat  4325 LYGGPLRDLEDRETLVSLTGACLN----------------PRNMNWVQPHT------PQY--LLA 4365

  Fly  4534 GLHPNAEIGFLTTASEQLLRTIFELQPRESELSSHCG---APREELVKIMIDDFLDKLQDEFNLQ 4595
            .|.|:.|:|.|...::  .:....|.|..||..: ||   .|:..|::
  Rat  4366 TLMPSPELGELDARTD--CKAQMHLLPTPSEPRT-CGLNEGPQAWLLR----------------- 4410

  Fly  4596 ALLNRVERKTPFVVVALQECER------MNALIREIKRSLRELMLGLRGELT-----ITQEMERL 4649
                   |::..::.||::|..      ...:::..:|.||:.::..:..|.     :|....|.
  Rat  4411 -------RQSRALLSALRQCSSTWVPTVCGGIVQRKERRLRQRLVQAKKRLVALQALLTNNRYRS 4468

  Fly  4650 DHAIFYDHVPAAWARLAYPSMLGLQSWFADLLHRIKELAGW-LNDF---------KLPC------ 4698
            ...:      ..||.|...:...|:.:....:..:|:|.|. |.|.         |.||
  Rat  4469 GQCV------TPWAVLGPNARPPLEGFLETEVLELKQLVGMLLRDLDCLLQQLKGKTPCTSSRCA 4527

  Fly  4699 ----AIWLGGLFNP-QSFLTA--------IMQESARKHDL--PLD-------------------- 4728
                |:|.|.|..| :|...|        :.|.|.|.|.|  .||
  Rat  4528 EVAQALWAGRLPQPWRSHAPAGPQLPWLWLRQLSRRGHLLIQYLDSGISENANGPERIFHLSAFR 4592

  Fly  4729 ---RMLISC---DVTKKQKDDVTLP----------------------------------PMEGAF 4753
               |:|::.   .|.:.......||                                  |..|..
  Rat  4593 HPRRLLLALRWEAVLENSGHSPKLPGHQGSGSGNLPPRRQELNNHPLHIWVENGPNPKVPKMGLL 4657

  Fly  4754 VHDLYMDGASWDCQLNSIVALRPKEMLCAMPVIYIKSIVQEKQELQ-----RVYECPLYKTRSRG 4813
            :..|.:..|:|| |.:..:........|.:|.:.:.:..:..::..     .:|.||||.|...|
  Rat  4658 LIGLQLQHAAWD-QTDGALKDSFSSQPCPLPPVSVSTQSRGAKDASVSAGLGIYSCPLYMTGPLG 4721

  Fly  4814 NTYVWTFN------LKTRERPSRWI 4832
            .|.:.:.|      |.||..|...|
  Rat  4722 TTKLHSKNILMRLPLPTRLSPDTCI 4746

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3339	NP_001036762.2	DHC_N1	276..903	CDD:285571	104/496 (21%)
		DHC_N2	1535..1944	CDD:285579	80/494 (16%)
		P-loop_NTPase	2095..2324	CDD:304359	67/255 (26%)
		P-loop_NTPase	2409..2544	CDD:304359	36/158 (23%)
		P-loop_NTPase	2731..3061	CDD:304359	76/362 (21%)
		P-loop_NTPase	3138..3406	CDD:304359	72/339 (21%)
		MT	3419..3759	CDD:289543	85/383 (22%)
		AAA_9	3789..4001	CDD:289547	56/317 (18%)
		Dynein_heavy	4142..4832	CDD:281078	161/854 (19%)
Dnhd1	XP_008758037.1	DHC_N2	1026..1476	CDD:285579	82/485 (17%)
		P-loop_NTPase	1659..1877	CDD:304359	59/223 (26%)
		P-loop_NTPase	2374..2660	CDD:304359	74/348 (21%)
		P-loop_NTPase	2877..3126	CDD:304359	67/278 (24%)
		MT	<3198..3475	CDD:289543	71/305 (23%)
		AAA_9	<3672..3810	CDD:289547	30/142 (21%)
		Dynein_heavy	3987..4746	CDD:281078	161/842 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5245
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900