DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3339 and Dnah3

DIOPT Version :9

Sequence 1:NP_001036762.2 Gene:CG3339 / 43295 FlyBaseID:FBgn0039510 Length:4842 Species:Drosophila melanogaster
Sequence 2:NP_001357735.1 Gene:Dnah3 / 381917 MGIID:2683040 Length:4072 Species:Mus musculus


Alignment Length:4325 Identity:1243/4325 - (28%)
Similarity:2055/4325 - (47%) Gaps:614/4325 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   737 LKEKSELQTLPI--QWNSLLSRRNILTTKLSNLQMKIWISWHECVDKLIIQGLDESVLSRSQDLS 799
            ||.|.::..:|.  :::|.||.:|...:.:::.:.:. :|..:.:|.::.|.::  :.|:.|..|
Mouse   139 LKAKDDVTGMPFVCKFSSSLSIKNTTDSSVTHPESRP-MSPEQQMDVMLQQEME--IESKEQKPS 200

  Fly   800 QLHLNFSQVLFTLLKETKYLLALQATGSLSGDLFQ-------------LPEPLLTLYGHRDAYWE 851
            :|.|.            :|...|  |..:..|:..             :|:.|||.......  :
Mouse   201 ELDLE------------RYYYYL--TNGIRKDMIAPENEEVMMRIYKLIPKTLLTTPALEPL--Q 249

  Fly   852 RRIRLIKIGEFYNGIRSGEC------AAAELQLIRNDLASIDEHVEVACQQLTWRNYNDELVAGI 910
            ..:|..|..::|..:.....      ...:.:|....:..:..| .|....:.|.|         
Mouse   250 VSLRSEKESDYYYSLMKSIVDYILMDPMEKKRLFIKSIPRLFPH-RVIRAPVPWHN--------- 304

  Fly   911 FEQSRDLFARLQQSHGNLDAILASMRRWSREPLHQ--------RSLYGRNLLDLR---------- 957
                                |..|.::|:.|.||.        :.|:.....:||          
Mouse   305 --------------------IYQSTKKWNEEHLHTVNPMMYKLKELWFAEFQNLRFVRTADLLAG 349

  Fly   958 ------HQQDRVRLRLLQCDETKMLLNRLLIANFCLFFNYESQEFQLYSRDLSVQEFIREFPEEQ 1016
                  |:...|..:  .|.|.:.:|....|......|..:.:.:         ..|..:...:.
Mouse   350 KLPLLPHEYKEVVQK--HCREARHILLTKWIPTCAQLFVTQKEHW---------VHFAPKNDYDS 403

  Fly  1017 RRQYNKYLASVDELICREVREAMRISLEYL----------------YKEMTATATATTTPTAPPV 1065
            .|...:|.|||...:..::|:.:..||..|                |:||               
Mouse   404 SRNIEEYFASVASFMSLQLRDLVIKSLRDLVSFFMIHKDGNDFKEPYQEM--------------- 453

  Fly  1066 DPGCSAGMARLVLQQITTPQATSTAGAGASGAPPTANDAPLFEVKLELTETEIRFSPAFDASVEN 1130
                          ....||                    |..:|||:.:..|.|:|.||     
Mouse   454 --------------DFFIPQ--------------------LIMIKLEVRDPIIVFNPTFD----- 479

  Fly  1131 NFQQIVEQLLLDIKQTCDCMPRIVADNAPSEDDEDDDTATVDYEQELRWEPREDRAQELQERKKK 1195
            :..|:::...|:|.:..|.:|::.:...|.....:....||:.|:.|           :.:...:
Mouse   480 DCWQLIKNSFLEIIKNSDGIPKVESILFPDLKGYNMILGTVNPEESL-----------VSDFLDQ 533

  Fly  1196 DLELEQEQGDPKPQAVQFNLLAAAKAYSQKMECTADGLEMLERAIRDALADTVAAASAYAAKFQA 1260
            .||:.:     |.|...:..|...|.|...::      .|.|:.|.:.|.:              
Mouse   534 TLEVFK-----KNQVGPYKYLNVYKKYDDLLD------NMAEKGISEFLKE-------------- 573

  Fly  1261 YAFLWTQQSSEVLAACMQTAREQTHHVSAGGYAIMETFKKEIENYNEVHDAIDQCENRECIN--- 1322
                                                  |.|||::....::|.:.:| |..:   
Mouse   574 --------------------------------------KHEIEDFVTSINSIKKRKN-EIASMHI 599

  Fly  1323 ----GWLALDIKPLKYGLLNLACKWSHMCKKWLLRYVQGTLKELNAFIARGFETL-----QLHIA 1378
                ....||...|.|.|    |:.:...|..|:.|.....:|.|..|...:.|:     ::...
Mouse   600 TVPLAMFCLDAVFLNYDL----CERAQNLKDNLILYQVDVNRETNTSICNQYSTIADKVSEIPAN 660

  Fly  1379 RQDFATLLRVLAIMSEIREREPYADNVFKPLKEIMGLLKTYNVEFEPQLLRGIEQLPQQ------ 1437
            ..:...|:..|...|::        .|||..:::..  .:..:||    |.....||.:      
Mouse   661 TAELVALIEYLKKSSDV--------TVFKLRRQLRD--ASERLEF----LMDYADLPNEDIKLNS 711

  Fly  1438 ----W-QQLKHSSTVKQEALQDTRFHQQQRVTALIGLHTCHLQHYARQ---FQKMPFFRVP---- 1490
                | .|::......:..|...|...:..:..........|:.|:::   |:|.......    
Mouse   712 NLFLWPDQIEDVFESSRNLLMSKRDQAEMDLIKRCSEFESRLEGYSKELEMFRKREVMTTEEMKN 776

  Fly  1491 -CPQVYDVCDEVYLRLHRFRRQQRLYTRWARLLDIQPPDPATLQFCEVELRRVKQLWDFVRVIES 1554
             ..:::|:...:.|.|..|    .|..:...||:.:......||...:.....:|||.......:
Mouse   777 NVEKLHDLSKNLDLALTEF----ELINKEEELLEKEKSSFPLLQTLMINKIPYEQLWVTAYEFST 837

  Fly  1555 CIVAWHATPWLLIDTDDMEHECKKFTRDLRTLDKCIREWAPYVHIVGVLRELVASLRAITE---- 1615
            ....|...|..|::.:.:..|.....|....|.|.:.:       |...:.|..:::...|    
Mouse   838 KSEEWMNGPLYLMNAEQIAEEIGNMWRTTYKLTKTLID-------VPAPKRLAENVKLKIEKFKQ 895

  Fly  1616 -------LQNPAITERHWMELMQLTKLSYKCNKSTRLAQLLTLQLQHHEEDIKNTVDRAIKEMTV 1673
                   ..||.:.:|||.::..:.....|..::|.||.:|........:.::.....|.||.::
Mouse   896 HIPILNIACNPGMKDRHWQQISDIVGYEIKPTETTCLANMLEYGFGKFVDKLEPIGAAASKEYSL 960

  Fly  1674 TKVLDEIKATWAHLEFELEQHHTRPHIQLLKVSE-ELIETLDDNQMQLQNISTSKHIEYLLDKLT 1737
            .|.|:::||.|.::.|...::.......|..|.: :||  |||:.::.|.:..|..|:.:..:..
Mouse   961 EKNLEKMKADWVNMCFSFVKYRDTDTSILCAVDDIQLI--LDDHVIKTQTMCGSVFIKPIEAECR 1023

  Fly  1738 HWQKVLGGIDTLIVNWFEVQRKWIYLECIFIGSADIRAQLPADAANFERIDEDFTALLAK-VQEV 1801
            .|::.|..:...:..|.:.|..|:|||.|| .|.||.||:|.:...|..:|..:.:|:|: |.:.
Mouse  1024 KWEEKLVRVQENLDAWLKCQVTWLYLEPIF-SSEDIIAQMPEEGKKFTTVDTYWKSLMAQAVNDT 1087

  Fly  1802 RVV-------MQVVLRHDDVLAQLLQLQHRLAVCEKALNDYLETKRLAFPRFYFISAADLLDILS 1859
            ||:       |...|:..:||.:.:|         :.||||||.|||.||||:|:|..:||:|||
Mouse  1088 RVMVAADQPRMTEKLQEANVLLEDIQ---------RGLNDYLEKKRLFFPRFFFLSNDELLEILS 1143

  Fly  1860 NGNNPQVIDRHLIKLFDSILRLQYETNTPNALGMHSKENDEYVPFVSFDPDQPAF-IVCGGRVEL 1923
            ...:|..:..||.|.|:.|.:|:: |:.....||.|.|. |.|||:     |..: :...|.||.
Mouse  1144 ETKDPLRVQPHLKKCFEGIAKLEF-TDNLEIKGMISSEK-ETVPFI-----QTIYPVKAKGMVEK 1201

  Fly  1924 WLRAIIQQMRSTLHELFRRALRVFGEKPRELWLYDWPAQVALCCSQISWTADVNRSFGCMEEGYE 1988
            ||:.:.|.|.:::.::....:..:.:.||..|:.:||.||.:|.|.|.||.:|:.:.      .|
Mouse  1202 WLQQVEQVMLASMRQVIENGIEAYVQVPRNAWVLEWPGQVVICVSSIFWTREVSEAL------VE 1260

  Fly  1989 GVMKELHKRQIAQLNALINLLLGELSPGDRQKIMTICTIDVHSRDVVGKIIASKVDNSLAFQWQS 2053
            ..:.:..|:...|:..::.|:.|:||.|.|..:..:..||||:||||.|:....:::...|||.|
Mouse  1261 DTLTDFLKKSNDQIAQIVELVRGKLSSGARLTLGALTVIDVHARDVVAKLRHDHINSLNDFQWIS 1325

  Fly  2054 QLRHRWDDDQAGSSSGRASTAISCGGGDEDCFANICDAEFRYAYEYLGNTSRLVITPLTDRCYIT 2118
            |||:.|.                    :::....:...|..|.||||||:.||||||||||||.|
Mouse  1326 QLRYYWT--------------------EKNVHVQMITTEALYGYEYLGNSPRLVITPLTDRCYRT 1370

  Fly  2119 LTQSLRLRLAGATAGPAGTGKTETTKDLGRALGVMVYVFNCSEQMDYKSCGNIYKGLAQTGAWGC 2183
            |..:|:|.|.||..||||||||||||||.:||.....|||||:.:|||:.|..:|||||.|||.|
Mouse  1371 LMGALKLNLGGAPEGPAGTGKTETTKDLAKALAKQCVVFNCSDGLDYKAMGKFFKGLAQAGAWAC 1435

  Fly  2184 FDEFNRICVEVLSVVAVQVKTIQEAIKMHKTQFIFMGERISLEPSVGIFITMNPGYAGRTELPEN 2248
            |||||||.||||||||.|:.:||:||.....:|||.|..:||.|:..:|||||||||||.|||:|
Mouse  1436 FDEFNRIEVEVLSVVAQQILSIQQAIIRKLKRFIFEGTELSLNPTCAVFITMNPGYAGRAELPDN 1500

  Fly  2249 LKTLFRPCAMIVPDFALICEIMLMAEGFQDARLLARKFITLYTLCKELLSKQDHYDWGLRAIKSV 2313
            ||.|||..||:|||:|||.||.|.:.||.|:|.||:|.:..|.||.|.||.|.|||:|:||:|||
Mouse  1501 LKALFRTVAMMVPDYALIGEISLYSMGFLDSRSLAQKIVATYRLCSEQLSSQHHYDYGMRAVKSV 1565

  Fly  2314 LVVAGTLKRDDHSRPEDQVLMRALRDFNIPKIVTEDVPIFMGLIGDLFPALDVPRKRVFEFEKTI 2378
            |..||.||.......|..:|:|||.|.|:.|.:.:|||:|.|:|.||||.:.:|:.....|.:.:
Mouse  1566 LTAAGNLKLKYPEENESVLLLRALLDVNLAKFLAQDVPLFQGIISDLFPGVVLPKPDYEVFLEAL 1630

  Fly  2379 RRAVNEIKLQPEEGFLMKVVQLQELLDVRHSVFIVGNAGTGKTKIWQT-------LRETYRIQKL 2436
            ...:.::||||...|:.|::|:.|::.|||...|||:...|||..::.       |....::::.
Mouse  1631 NNNIRKMKLQPVPWFIGKIIQIYEMMLVRHGYMIVGDPMGGKTSAYKVLAAALGDLHAANQMEEF 1695

  Fly  2437 KPVCHVLNPKALSNDELFGIVNPTTREWKDGLFSSIMREQANMPPGNPKWIVLDGDIDPMWIESL 2501
            .....::||||::..:|:|..:..:.||.||:.::..||||:....:.|||:.||.:|.:|||::
Mouse  1696 AVEFKIINPKAITMGQLYGCFDAVSHEWTDGVLANAFREQASSITDDRKWIIFDGPVDAVWIENM 1760

  Fly  2502 NTLMDDNKILTLASNERISLKREMRLLFEVGHLKAATPATVSRAGILYINPQDLGWSPYVSSWLE 2566
            ||::||||.|.|.|.|.|.:..:|.|:||...|:.|:||||||.|::|:....|||.|...|:::
Mouse  1761 NTVLDDNKKLCLMSGEIIQMSSKMSLIFEPADLEQASPATVSRCGMIYMEAHQLGWKPLKDSYMD 1825

  Fly  2567 TRVDMIERGIL---NALFEKYFPCLMQRQRDFRRI--------TPI-TDMAMIQMTCHLLECLLD 2619
            |    :.|.:.   ..|.|..|..|:|...||.|:        :|| ...:|:::...||:.:.|
Mouse  1826 T----LPRCLTKEHTELVEDMFTWLVQPCLDFSRLHCKFVVQTSPIHLAFSMMRLYSSLLDEIRD 1886

  Fly  2620 SDEGNADGRGRGSATGGAANPHSLHHGELSHEAMVMALETIFVYATVWSFGSALSQDVIIDWHRE 2684
            ..|...:                ::.| ||.:.:.:.|:.:|:::.||:....::.:....:...
Mouse  1887 IQEEEME----------------IYEG-LSSQQIFLWLQGLFLFSLVWTLAGTINAESRKKFDVF 1934

  Fly  2685 FHKWWIG------EFKDIKL------PSQGTVFDYQLNVQTLK-----FQPWSELAAHQSLEGQI 2732
            |....:|      ..|.:||      |.:|:::|:..    ||     :..|:|....:  |..|
Mouse  1935 FRNLIMGMDDRNPRPKSVKLTKNNIFPERGSIYDFYF----LKQGGGHWNAWTEYITKE--EETI 1993

  Fly  2733 DSETPLQNVLISTAETIRLAYFLKLLIDRNLACMLVGNSGCGKGAIFRQLFGQYANDQELLEVAV 2797
            .:...:.:::|.|.||.|.::|||..:|..:..:.||.:|.||.||        .||..|     
Mouse  1994 PANAKVSDLIIPTMETARQSFFLKTYLDHEIPILFVGPTGTGKSAI--------TNDFLL----- 2045

  Fly  2798 SAATAGDSSHQQQSGNPAGAVVVRRKASSSATPLLTTVQATHFNFYTSSEIFQKMLDRPLEKKSG 2862
                     |..::......:....:.|::.|                .:|....|||   ::.|
Mouse  2046 ---------HLPKNVYQPNFINFSARTSANQT----------------QDIIMSKLDR---RRKG 2082

  Fly  2863 RCYAPSGPKRRLIYFVNDLNMPEVDAYGTVQPHTIMRQFMDYRQWYDRQRLQLKDIRHCQFAACM 2927
            ....|.|  ::.:.||:|||||..:.||...|..::||::|:..|:|::.....||........|
Mouse  2083 LFGPPIG--KKAVVFVDDLNMPAKEVYGAQPPIELLRQWIDHGYWFDKKDTNRLDIVDVLLVTAM 2145

  Fly  2928 NPTAGSFT-IDPRLQRHFCVFSVAPPGEDTLHHIYGSILSSHLESPSQGFTKEIRSIGSLLVRVG 2991
            .|..|... |..|..||..:.|:....::.|..|:.||...|.   .:||.......|.:||:..
Mouse  2146 GPPGGGRNDITGRFTRHLNIISINAFEDEILTKIFSSIADWHF---GKGFDVMFLRYGKMLVQAT 2207

  Fly  2992 IALHRRVEYAFLPTALKFHYLFNLRDLTGIYQGLMNSVGAPASAGGGGASGFGGTICSRP----- 3051
            ..::|.....||||..|.||:|||||.:.:.||::                    :|...     
Mouse  2208 QTIYRAAVENFLPTPSKSHYVFNLRDFSRVIQGVL--------------------LCPHTHLQDL 2252

  Fly  3052 SELMRLYVHEAFRVYHDRLVDPYDIKSF----KSSIRDIFKKDFEDFDEDFVFAEPL--IYSHFA 3110
            .:.:||::||.:||::|||:|..|.::|    |.:..:.||:..|   :..:...|.  |.....
Mouse  2253 EKFIRLWIHEVYRVFYDRLIDNDDRQTFFNLVKETTSNCFKQTME---KVLIHLSPTGKITDDNI 2314

  Fly  3111 QSLVDQKYMPLKSWDSLYQLLIEAQA----------SYNEV-VGYMNLVLFEDAMIHVCRINRIL 3164
            :||....|:..:|...:|..:|:.:.          .:|.| ...|:||:|:.|:.|:.||.|:|
Mouse  2315 RSLFFGDYLKPESDQKIYDEIIDLRGLTVVMEYYLDEFNSVSKAPMSLVMFKFAIEHISRICRVL 2379

  Fly  3165 ESPRGNALLIGVGGSGKQTLARLAAFISSLNVSQIQIKRGFGLLDMREEIGNLYMKVGLKNLASV 3229
            :..:|:.||:|:||||:|:..:|:.|::|..:.||:|.:.:...|.||::..:.::.|:...::|
Mouse  2380 KQKKGHLLLVGIGGSGRQSATKLSTFMNSYELYQIEITKNYTNSDWREDLKKIMLQSGVATKSTV 2444

  Fly  3230 FLISDAQIPDESILMLINDLLASGEIPELFNDDQLDTITNGIRNEVKQSG--TLDTKENCWRYFV 3292
            ||.||.||..||.:..||.||.:|::|.:|..|:...:...::...:..|  ...|..:.:.:|:
Mouse  2445 FLFSDNQIKHESFVEDINMLLNTGDVPNIFPADEKADLVEKMQTAARTEGEKVEATPLSMYNFFI 2509

  Fly  3293 EKVRRLLKVVLCFSPVGQTLRVRARKFPAIISRTAIDWFHEWPKSALESVSQKFLNEINGILEPA 3357
            |:||:.|.:||..||:|...|.|.|.||::|:...||||..||..|||.|:.|||.::.  |:..
Mouse  2510 ERVRKNLHIVLAMSPIGDAFRTRLRMFPSLINCCTIDWFQSWPTDALELVANKFLEDVE--LDDN 2572

  Fly  3358 LVPPIGCFMAYVHGTVNQISRIYLQNEKRYNYTTPKTFLEYIFLYRKLLVDKNGEFAERIARLQS 3422
            :...:.....|...:|.::|..|.....|:||.||.::||.|..::.||..|..|......|..:
Mouse  2573 IRAEVVSMCKYFQESVKKLSVDYYNTLLRHNYVTPTSYLELILTFKTLLNSKRQEVDTIRNRYLA 2637

  Fly  3423 GMSKLAECARQVDTLKHQLAIQEVQLAAKNAAADKLIVIVSAESEKVKRERYIASEEEKRVRIIE 3487
            |:.||...:.||..::.:|...:.||...:.....::|.:..|:::...::.:...:||......
Mouse  2638 GLQKLEFASSQVAVMQVELTALQPQLIQTSEDTAMMMVKIELETKEADAKKLLVQADEKEANAAA 2702

  Fly  3488 E-DVSIKTKMCEEDLRQAEPALVAAQAALNTLNKNNLTELKSFGSPPKAVVNVCAAVMVLL---- 3547
            . ..:||.: ||.||.:|.|||.||.|||:|||.:::|.:||..:||..|..|..::.|:.    
Mouse  2703 AISQAIKNE-CEGDLAEAMPALEAALAALDTLNPSDITLVKSMQNPPGPVKLVMESICVMKGLKP 2766

  Fly  3548 ------ASNGKIPRDRSWKASKLMMVRVDQFLNDLLNYNKDNIHPNIIETLQE-YLKDPEFNPDK 3605
                  :.:||:..| .|..|:.::..: :||..|..|:||||...|::.::| ::..|:|.|..
Mouse  2767 ERKPDPSGSGKMIED-YWGVSRKILGDL-KFLESLKTYDKDNIPSVIMKRIRERFIDHPDFQPAV 2829

  Fly  3606 VVQKSVAAAGLCAWVINLHRYHQVFLIVGPKQQALQDSHQELLEARERLQYLKAKINNLEAKLAE 3670
            :...|.|..|||.||..:..|.:|..:|.||::.|:::..:|....::|...:|::..:|.:|.:
Mouse  2830 IKNVSSACEGLCKWVRAMEVYDRVAKVVAPKRERLREAEGKLEIQMQKLNQKRAELKLVEDRLQD 2894

  Fly  3671 IQAEFENAVGEKQRCQREADKTAFTIDLAHRLVNGLANENVRWKESVQSLLAKIGTLPGDILLIS 3735
            :..|||....:|...::..:..:..:..|.:|::||..|..||.|:.:.|..:...|.||:||.|
Mouse  2895 LNDEFELMNRKKNSLEKNIEICSQKLVRAEKLISGLGGEKDRWTEAARQLGIRYDNLTGDVLLAS 2959

  Fly  3736 SFLSYVGCFTRRYREELQHKMWLPNFRKIDPHIPHTEGVDTLALFSDDAQIAAWNNEGLPMDRMS 3800
            ..::|:|.||..||.:.|:: ||.:.:  |..||.:..........|..:|.||...|||:|..|
Mouse  2960 GTVAYLGAFTVDYRAQCQNE-WLVSCK--DKVIPGSVDFSLSNTLGDPIKIRAWQIAGLPVDSFS 3021

  Fly  3801 TENATILQYSTRWPLMIDPQLQGIKWIKNRFGTD-LVVLRLRQKGFLEALEKSISQGDTVLIEQI 3864
            .:|..|:..|.|||||||||.|..||:||...|: |.|::.....::..||.::..|..||:|.:
Mouse  3022 VDNGIIVSNSRRWPLMIDPQGQANKWVKNMEKTNKLSVIKFSDTNYVRTLENALQFGTPVLLENV 3086

  Fly  3865 EESMDTVLEPLLSRALIKKG--RYLRIGDKEIEFHASFRLILHTKMANPHYKPEMQAQTTLINFT 3927
            .|.:|..:||:|.:|..|:.  .|:|:|:..||:...|:..:.|::.||||.||:..:..|:||.
Mouse  3087 GEELDAFIEPILLKATFKQQGVEYMRLGENIIEYSREFKFYITTRLRNPHYLPEVAVKVCLLNFM 3151

  Fly  3928 VTPDGLEEQLLAEVVKIERPDLEQMKTEVTVQQNKFKISLKALEDELLARLASSGENVLDDHALV 3992
            :||.||::|||..|...|:|:||:.|.::.::..:.|..||.:||::|..|:....|:|:|...:
Mouse  3152 ITPLGLQDQLLGIVAAKEKPELEEKKNKLILESAQNKKQLKEIEDKILEVLSLCEGNILEDETAI 3216

  Fly  3993 INLENTKRTVDEIEAKVREARVTTLQIDDTRNIYRSAAKRAAILYFVLTDLSRINPIYKFSLKSF 4057
            ..|.::|...:||..|...|.||..|||:||..|:..|..:|.::|.::||:.|.|:|::||..|
Mouse  3217 KILSSSKVLSEEISEKQEIASVTETQIDETRMGYKPVAVHSAAIFFCISDLAHIEPMYQYSLTWF 3281

  Fly  4058 MNVFRQAIAMAAESKNYEKRVLHLVESITLQTYRYTLRGLFEADKLTFTSHMTLRILIAAEQVAK 4122
            :|::.|::|.:.:|...:.|:.:::|..||..|....|.|||.|||.|:..:|:.:|...:.:.:
Mouse  3282 INLYVQSLANSNKSDELDLRIEYIIEHFTLSIYNNVCRSLFEKDKLLFSLLLTVGLLKERKAIDE 3346

  Fly  4123 DETDFLLR--------FPHDPTTLSPLDFVGRSAWGGIKSLTLIEHFYGIDKDMENYTKRWRKFM 4179
            :...|||.        ||:.    :| :::...:||.|...:.::...|:.:|:....|.|:...
Mouse  3347 EVWYFLLTGGVALDNPFPNP----AP-EWLSEKSWGEIVRASSLQKLKGLMEDVMQNIKVWKDIY 3406

  Fly  4180 ASDTPEREQFPGEWKHRTPLQKLCIIRSLRPDRMTYAMRQFVEQTMGRSYAEIQTPPFGAIFQEL 4244
            .|..|..|..|..|.....|:|:.|:|.||||::..|::.|:.:|||:.:.|..|......:.:.
Mouse  3407 DSAWPHEESLPSPWFFLQTLEKIAILRCLRPDKIVPAIQNFICETMGKIFIEAPTFDLQGSYGDS 3471

  Fly  4245 NAATPAFFILSPGVDPIR-------DVERYGQRQGFHSESDTLVNISLGQGQELLAEQAIIGALE 4302
            :...|..||||||.||:.       ||...|      :::.|   |||||||..:|...|..|:.
Mouse  3472 SCCVPLIFILSPGADPMAGLLKFADDVSMGG------TKTQT---ISLGQGQGPIAANMINKAIH 3527

  Fly  4303 SGQQWVILQNIHLVVNWLPTLEKLIERIVLQSESKGESNFRLFISAEPAPDPQYHVIPQGILESS 4367
            .| .||:|||.||..:|:|.|||:.|.:::...:..|  |||::::.|:     ...|..||::.
Mouse  3528 EG-TWVVLQNCHLATSWMPALEKICEEVIVPENTNSE--FRLWLTSYPS-----EKFPVSILQNG 3584

  Fly  4368 LKVVNEPPSGMAANLHKAWDNFS-QDAL--ETCTQEAEFKSILFALCYFHAVAGERRKFGPQGWN 4429
            :|:.||||.|:.|||.:::.|.. .|.|  ::||:...::.:||.||:|||:..|||.:|..|||
Mouse  3585 IKMTNEPPKGLRANLLRSYLNDPISDPLFFQSCTKPVIWQKLLFGLCFFHAIVQERRNYGALGWN 3649

  Fly  4430 KVYPFNIGDLTISSNVLHNYLEGSNRIPWEDLRYLFGEIMYGGHITDDWDRRLCQTYLEELLQQD 4494
            ..|.||..||.||...:..:|.....:|:|.|.||.||..|||.:|||.||||..:.|.....::
Mouse  3650 IPYEFNESDLRISMRQIQMFLNDYEEVPFEALTYLTGECNYGGRVTDDKDRRLLLSLLSMFYCKE 3714

  Fly  4495 LIDGDFELCPG--FPAPPNLDFEGYHSYITEMLPEESPLLYGLHPNAEIGFLTTASEQLLRTIFE 4557
            :...::.:.||  :..||...::.|..|:..:.....|.::|||.||:|......:.||.:.:..
Mouse  3715 IETDNYHIAPGDAYVIPPYGSYQSYIEYLRTLPITAHPEVFGLHENADITKDNQETNQLFQGVLL 3779

  Fly  4558 LQPRESELSSHCGAPREELVKIMIDDFLDKLQDEFNLQALLNR--VERKTPFVVVALQECERMNA 4620
            ..||:|..|   |...:|:|:.:..|.|.||.::|||:.::.:  |..|.....|..||..|.|.
Mouse  3780 TLPRQSGGS---GKSPQEVVEELAQDILSKLPNDFNLEEVMKKYPVVYKESMNTVLRQELIRFNR 3841

  Fly  4621 LIREIKRSLRELMLGLRGELTITQEMERLDHAIFYDHVPAAWARLAYPSMLGLQSWFADLLHRIK 4685
            |.:.::|||.:|...::|::.::.|:|.:.:::....|||.||..:|||:..|..:.||||.|:.
Mouse  3842 LTKVVRRSLIDLGRAIKGQVLMSSELEEVFNSMLVGKVPAMWAAKSYPSLKPLGGYVADLLARLT 3906

  Fly  4686 ELAGWLNDFKLPCAIWLGGLFNPQSFLTAIMQESARKHDLPLDRMLISCDVTKKQKDDVTLPPME 4750
            ....|: |...|...|:.|.:..|||||.:.|..|||:.:|:|.:....:||.|:.....:|. :
Mouse  3907 FFQEWI-DKGPPVVFWISGFYFTQSFLTGVSQNYARKYTIPIDHIGFEFEVTPKETTMENIPE-D 3969

  Fly  4751 GAFVHDLYMDGASWDCQLNSIVALRPKEMLCAMPVIYIKSIVQEKQELQRVYECPLYKTRSR--- 4812
            ||::..|:::||.||...:.|....||.:...:|:|::|.........|.:|.||:|||.:|   
Mouse  3970 GAYIKGLFLEGARWDRSTSQIGESLPKILYDPLPIIWLKPGESASFLHQDIYVCPVYKTSARRGI 4034

  Fly  4813 ------GNTYVWTFNLKTRERPSRWILGGVALLLQ 4841
                  ...||.:..|.|......||..|||.|.|
Mouse  4035 LSTTGHSTNYVLSIELPTDMPQKHWINRGVASLCQ 4069

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3339NP_001036762.2 DHC_N1 276..903 CDD:285571 32/186 (17%)
DHC_N2 1535..1944 CDD:285579 114/429 (27%)
P-loop_NTPase 2095..2324 CDD:304359 146/228 (64%)
P-loop_NTPase 2409..2544 CDD:304359 51/141 (36%)
P-loop_NTPase 2731..3061 CDD:304359 83/335 (25%)
P-loop_NTPase 3138..3406 CDD:304359 92/270 (34%)
MT 3419..3759 CDD:289543 102/351 (29%)
AAA_9 3789..4001 CDD:289547 80/214 (37%)
Dynein_heavy 4142..4832 CDD:281078 229/712 (32%)
Dnah3NP_001357735.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
DHC_N2 824..1221 CDD:369852 114/422 (27%)
DYN1 1018..3745 CDD:227570 956/2895 (33%)
AAA_6 1347..1673 CDD:372306 181/325 (56%)
AAA 1. /evidence=ECO:0000250 1347..1568 142/220 (65%)
AAA 2. /evidence=ECO:0000250 1628..1859 81/234 (35%)
AAA 3. /evidence=ECO:0000250 1992..2240 78/293 (27%)
AAA 4. /evidence=ECO:0000250 2351..2602 84/252 (33%)
AAA_8 2360..2620 CDD:372310 90/261 (34%)
Stalk. /evidence=ECO:0000250 2617..2916 83/301 (28%)
AAA 5. /evidence=ECO:0000250 3001..3231 85/229 (37%)
AAA 6. /evidence=ECO:0000250 3444..3668 86/240 (36%)
Dynein_C 3767..4068 CDD:375627 95/305 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100025
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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