DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3339 and Dync1h1

DIOPT Version :9

Sequence 1:NP_001036762.2 Gene:CG3339 / 43295 FlyBaseID:FBgn0039510 Length:4842 Species:Drosophila melanogaster
Sequence 2:NP_062099.3 Gene:Dync1h1 / 29489 RGDID:2511 Length:4644 Species:Rattus norvegicus


Alignment Length:5068 Identity:1252/5068 - (24%)
Similarity:2191/5068 - (43%) Gaps:959/5068 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VLYGDFPVHSKIETMSLLFD---DVLQPLLEQAQSQ-WPAIVRK-------------DLQARIKE 230
            |:..|.||.|::..::|..|   :.|...:..|.:. :.:.:|:             .::.:|.|
  Rat   122 VIDADKPVSSQLRVLTLSEDSPYETLHSFISNAVAPFFKSYIRESGKADRDGDKMAPSVEKKIAE 186

  Fly   231 VRNTLTEIKGKTNNRTI--LSLLVSPTIVEEVFAHVSQGHLRPAL--------DPKFRNLLEEMF 285
            :...|..::   .|..|  :||.:.|.|.........:|. :|.:        ||.|.|.|:...
  Rat   187 LEMGLLHLQ---QNIEIPEISLPIHPIITNVAKQCYERGE-KPKVTDFGDKVEDPTFLNQLQSGV 247

  Fly   286 INWTTQMHDIV-LERSECQPLGSTTQSAGHQPKYITLVSLPAQEIGFWTNRKLNLQNIYEQLRES 349
            ..|..::..:. |:|   .|...|.                .|||.||.|.:..|..|.|: |||
  Rat   248 NRWIREIQKVTKLDR---DPASGTA----------------LQEISFWLNLERALYRIQEK-RES 292

  Fly   350 T---------------HKT--------LAQILERIESVYYEPYATAFRKLVAAWLEAQDVSLWLQ 391
            .               |.|        |.|.||.:..  |.|....|.               |.
  Rat   293 PEVLLTLDILKHGKRFHATVSFDTDTGLKQALETVND--YNPLMKDFP---------------LN 340

  Fly   392 PLLRQTAAFNSVQFSNGHDLVAPLVHIVHLVWSNARYYRSTQRMSVLLRCICNMLVHRAAEDLEL 456
            .||..|......|     .|||...|:..:  .|.:|  ..||   .||     ||...:.||..
  Rat   341 DLLSATELDKIRQ-----ALVAIFTHLRKI--RNTKY--PIQR---ALR-----LVEAISRDLSS 388

  Fly   457 QLL-------FQGDADEGLLKINRTIAVLELFKQRMLDYKERYAGSQVLLPALSEGAAAVASSPS 514
            |||       ....|.|...|:  .:|..|:|:    .:.:.|...||||       ..:.....
  Rat   389 QLLKVLGTRKLMHVAYEEFEKV--MVACFEVFQ----TWDDEYEKLQVLL-------RDIVKRKR 440

  Fly   515 PDDQQQLWRF--CHEDVFGQTLDGFSLQLLELRQVFEAAVQFQQLEKLEVGGLRGKILT------ 571
            .::.:.:||.  .|..:..: ||    |:.:.|:      |.:||..:.|..||.::..      
  Rat   441 EENLKMVWRINPAHRKLQAR-LD----QMRKFRR------QHEQLRAVIVRVLRPQVTAVAQQNQ 494

  Fly   572 --------ERVREI---------FGEFKVLFEQWSNVD-IDLTATVASKWKCFRREQTLFFSRMQ 618
                    .:|.|:         ..|..:.:|....|| :|::......|:...:.   :..|:.
  Rat   495 GEAPEPQDMKVAEVLFDAADANAIEEVNLAYENVKEVDGLDVSKEGTEAWEAAMKR---YDERID 556

  Fly   619 LLEQKLATVLLQAFEQCHSWMHLLRLTLMFGSLLQREAVRPELARVLPHILFIYDTEMEQLEDSV 683
            .:|.::...|........:...:.|:...|.:|..|..:|..:......::.....::|.|.|  
  Rat   557 RVETRITARLRDQLGTAKNANEMFRIFSRFNALFVRPHIRGAIREYQTQLIQRVKDDIESLHD-- 619

  Fly   684 GEVLLGYEIRGLAALPLANNFPPIANAMMWLEQ-------HISRCDEFGAKELSQLVE-QLLKE- 739
             :..:.|.......:....:.||::.:::|.:|       ::.|.::...|.....|| |.||: 
  Rat   620 -KFKVQYPQSQACKMSHVRDLPPVSGSIIWAKQIDRQLTAYMKRVEDVLGKGWENHVEGQKLKQD 683

  Fly   740 ----KSELQTLPI--QWNSLLSRRNILTTKLSNLQMKIWISWHECVDKLIIQGLDESVLSRSQDL 798
                :.:|.|..|  .|...:.:||:      .:..:|:     .::...::|       ||.::
  Rat   684 GDSFRMKLNTQEIFDDWARKVQQRNL------GVSGRIF-----TIESARVRG-------RSGNV 730

  Fly   799 SQLHLNFSQVLFTLLKETKYLLALQATGSLSGDLFQLPEPLLTLYGHRDAYWERRIRLIKIGEFY 863
            .:|.:||...:.||.||.:.|..|.         |::|..::......:..:...|.||:....|
  Rat   731 LKLKVNFLPEIITLSKEVRNLKWLG---------FRVPLAIVNKAHQANQLYPFAISLIESVRTY 786

  Fly   864 NGIRSGECAAAELQLIRNDLASIDEHVEVACQQLTWRNYNDELVAGIFEQSRDLFARLQQSHGNL 928
                                       |..|:::..||....||||:.::.:.|.|         
  Rat   787 ---------------------------ERTCEKVEERNTISLLVAGLKKEVQALIA--------- 815

  Fly   929 DAILASMRRWSREPLHQRSLYGRNLLDLRHQQDRVRLRLLQCDETKMLLNRLLIANFCLFFNYES 993
            :.|......:..:|..||  ....:.:.:.:.|    .||..:|...|..|.|  ..|:   |:.
  Rat   816 EGIALVWESYKLDPYVQR--LAETVFNFQEKVD----DLLIIEEKIDLEVRSL--ETCM---YDH 869

  Fly   994 QEF-QLYSRDLSVQEFIREFPEEQRRQYNKYLASVDELICREVREAMRISLEYLYKEMTATATAT 1057
            :.| ::.:|   ||:.:.:.   ....|:.....|::| ..|:...:.:.|:             
  Rat   870 KTFSEILNR---VQKAVDDL---NLHSYSNLPIWVNKL-DMEIERILGVRLQ------------- 914

  Fly  1058 TTPTAPPVDPGCSAGMARLVLQQITTPQATSTAGAGASGAPPTANDAPLFEVKLELTETEIRFSP 1122
                         ||:.  ...|:...||...|                 ||.::....::...|
  Rat   915 -------------AGLR--AWTQVLLGQAEDKA-----------------EVDMDTDAPQVSHKP 947

  Fly  1123 AFDASVENNFQQIVEQLLLDIKQTCDCMPRIVADNAPSEDDEDDDTATVDYEQELRWEPREDRAQ 1187
            ..:..::|    :|.:|.:        ..:::..|.|.|                  |.|....|
  Rat   948 GGEPKIKN----VVHELRI--------TNQVIYLNPPIE------------------ECRYKLYQ 982

  Fly  1188 ELQERKKKDLELEQEQGDPKPQAVQFNLLAAAKAYSQKMECTADGLEMLERAIRDALADTVAAAS 1252
            |:...|...|.|.:.|.......|.:.|....|.|...:....||...||.:. .|:...|....
  Rat   983 EMFAWKMIVLSLPRIQSQRYQVGVHYELTEEEKFYRNALTRMPDGPVALEESY-SAVMGIVTEVE 1046

  Fly  1253 AYAAKFQAYAFLWTQQSSEVL-----------AACMQTAREQTHHVSAGGYAIMETFKKE----I 1302
            .|...:..|..||..|:..:.           |..:|..|      :.|.:...|| |||    :
  Rat  1047 QYVKVWLQYQCLWDMQAENIYNRLGEDLSKWQALLVQIRR------ARGTFDNAET-KKEFGPVV 1104

  Fly  1303 ENYNEVHDAIDQCENRECINGWLALDIKPLKYGLLNLACKWSHMCKKWLLRYVQ---GTLKELNA 1364
            .:|.:|...::                  |||.      .|.   |:.|.::.|   ..:.|.::
  Rat  1105 IDYGKVQSKVN------------------LKYD------SWH---KEVLSKFGQMLGSNMTEFHS 1142

  Fly  1365 FIARGFETLQLH----IARQDFATLLR-VLAIMSEIREREPYADNVFKPLKEI------MGLLKT 1418
            .|::..:.|:.|    .:..|..|.:. |.::..:|::.|          |::      ..||:.
  Rat  1143 QISKSRQELEQHSVDTASTSDAVTFITYVQSLKRKIKQFE----------KQVELYRNGQRLLEK 1197

  Fly  1419 YNVEFEPQLLRGIEQLPQQW------QQLKHSSTVKQEALQDTRFHQ-----QQRVTALI----- 1467
            ...:|.|..|. |:.:..:|      .:.|.|:..:|.|....:..|     :.|.|.|:     
  Rat  1198 QRFQFPPSWLY-IDNIEGEWGAFNDIMRRKDSAIQQQVANLQMKIVQEDRAVESRTTDLLTDWEK 1261

  Fly  1468 ------------GLHTCHLQHYARQFQKMPFFRVPCPQVYDVCDEVYLRLHRFRRQQRLYTRWAR 1520
                        .|..  |..|..:|.::...|..|.:..:..:                     
  Rat  1262 TKPVTGNLRPEEALQA--LTIYEGKFGRLKDDREKCAKAKEALE--------------------- 1303

  Fly  1521 LLD--IQPPDPATLQFCEVELRRVKQLWDFVRVIESCIVAWHATPWLLIDTDDMEHECKKFTRDL 1583
            |.|  :.......:|....||:.:|.:|..:..:...|......||:.:....:..........|
  Rat  1304 LTDTGLLSGSEERVQVALEELQDLKGVWSELSKVWEQIDQMKEQPWVSVQPRKLRQNLDGLLNQL 1368

  Fly  1584 RTLDKCIREWAPYVHIVGVLRELVASLRAITELQNPAITERHWMELMQLTKLSYKCNKSTRLAQL 1648
            :.....:|::|.|..:..:|:..:.....:.||::.|:.:|||.:||:...:::..::.| |.|:
  Rat  1369 KNFPARLRQYASYEFVQRLLKGYMKINMLVIELKSEALKDRHWKQLMKRLHVNWVVSELT-LGQI 1432

  Fly  1649 LTLQLQHHEEDIKNTVDRAIKEMTVTKVLDEIKATWAHLEFELEQHHTRPHIQLLKVSEELIETL 1713
            ..:.||.:|..:|:.:..|..||.:.:.|.:|:..|...|.:|..:..:  .:|::..::|...:
  Rat  1433 WDVDLQKNEAIVKDVLLVAQGEMALEEFLKQIREVWNTYELDLVNYQNK--CRLIRGWDDLFNKV 1495

  Fly  1714 DDNQMQLQNISTSKHIEYLLDKLTHWQKVLGGIDTLIVNWFEVQRKWIYLECIFIGSADIRAQLP 1778
            .::...:..:..|.:.:...:....|:..|..|..|...|.:|||:|:|||.||.|||||:..||
  Rat  1496 KEHINSVSAMKLSPYYKVFEEDALSWEDKLNRIMALFDVWIDVQRRWVYLEGIFTGSADIKHLLP 1560

  Fly  1779 ADAANFERIDEDFTALLAKVQEVRVVMQVVLRHDDVLAQLLQLQHRLAVCEKALNDYLETKRLAF 1843
            .:...|:.|..:|.||:.||.:..:||. ||....|...|.:|...|...:|||.:|||.:|.:|
  Rat  1561 VETQRFQSISTEFLALMKKVSKSPLVMD-VLNIQGVQRSLERLADLLGKIQKALGEYLERERSSF 1624

  Fly  1844 PRFYFISAADLLDILSNGNNPQVIDRHLIKLFDSILRLQYETNTPNALGMHSKENDEYVPFVSFD 1908
            |||||:...|||:|:.|..|...:.:|..|:|..:..:....::...||:.|:|.:|    |.| 
  Rat  1625 PRFYFVGDEDLLEIIGNSKNVAKLQKHFKKMFAGVSSIILNEDSSVVLGISSREGEE----VMF- 1684

  Fly  1909 PDQPAFIVCGGRVELWLRAIIQQMRSTLHELFRRA---LRVFGE----KPRE--LWLYDWPAQVA 1964
             ..|..|....::..||..:.::||.||.:|...:   :.:||:    .|..  .|:..:.||:.
  Rat  1685 -KTPVSITEHPKINEWLTLVEKEMRVTLAKLLAESVTEVEIFGKATSIDPNTYITWIDKYQAQLV 1748

  Fly  1965 LCCSQISWTADVNRSFGCMEEGYE-GVMKELHKRQIAQLNALINLLLGELSPGDRQKIMTICTID 2028
            :..:||:|:.:|..:...:..|.: |.::.:.......||.|.:.:|.|..|..|:|:..:.|..
  Rat  1749 VLSAQIAWSENVENALSNVGGGGDVGPLQSVLSNVEVTLNVLADSVLMEQPPLRRRKLEHLITEL 1813

  Fly  2029 VHSRDVVGKIIASKVDNSLAFQWQSQLRHRWDDDQAGSSSGRASTAISCGGGDEDCFANICDAEF 2093
            ||.|||...:|.||:||:.:|:|.||:|..:|..|....              :.....:.:|:|
  Rat  1814 VHQRDVTRSLIKSKIDNAKSFEWLSQMRFYFDPKQTDVL--------------QQLSIQMANAKF 1864

  Fly  2094 RYAYEYLGNTSRLVITPLTDRCYITLTQSLRLRLAGATAGPAGTGKTETTKDLGRALGVMVYVFN 2158
            .|.:||||...:||.||||||||:|:||:|..||.|:..|||||||||:.|.||..||..|.|||
  Rat  1865 NYGFEYLGVQDKLVQTPLTDRCYLTMTQALEARLGGSPFGPAGTGKTESVKALGHQLGRFVLVFN 1929

  Fly  2159 CSEQMDYKSCGNIYKGLAQTGAWGCFDEFNRICVEVLSVVAVQVKTIQEAIKMH------KTQ-- 2215
            |.|..|:::.|.|:.||.|.|||||||||||:...:||.|:.||:.||||::.|      ||.  
  Rat  1930 CDETFDFQAMGRIFVGLCQVGAWGCFDEFNRLEERMLSAVSQQVQCIQEALREHSNPNYDKTSAP 1994

  Fly  2216 --FIFMGERISLEPSVGIFITMNPGYAGRTELPENLKTLFRPCAMIVPDFALICEIMLMAEGFQD 2278
              ...:.:::.:.|.:.||||||||||||:.||:|||.|||..||..||..||.::||.::||:.
  Rat  1995 ITCELLNKQVKVSPDMAIFITMNPGYAGRSNLPDNLKKLFRSLAMTKPDRQLIAQVMLYSQGFRT 2059

  Fly  2279 ARLLARKFITLYTLCKELLSKQDHYDWGLRAIKSVLVVAGTLKRD-------------------- 2323
            |.:||.|.:..:.||.|.||.|.|||:||||:|||||.||.:||:                    
  Rat  2060 AEVLANKIVPFFKLCDEQLSSQSHYDFGLRALKSVLVSAGNVKRERIQKIKREKEERGEAVDEGE 2124

  Fly  2324 -DHSRPEDQVLMRALRDFNIPKIVTEDVPIFMGLIGDLFPALDVPRKRVFEFEKTIRRAVNEIKL 2387
             ..:.||.::|::::.:..:||:|.||:|:...|:.|:||.:...|..:....:.:::...|:.|
  Rat  2125 IAENLPEQEILIQSVCETMVPKLVAEDIPLLFSLLSDVFPGVQYHRGEMTALREELKKVCQEMYL 2189

  Fly  2388 QPEEG------FLMKVVQLQELLDVRHSVFIVGNAGTGKTKIWQT-LRETYRIQKLKPVCHVLNP 2445
            ...:|      ::.||:||.::..:.|.:.:||.:|:||:..|:. |:...|::.::.|.|:::|
  Rat  2190 TYGDGEEVGGMWVEKVLQLYQITQINHGLMMVGPSGSGKSMAWRVLLKALERLEGVEGVAHIIDP 2254

  Fly  2446 KALSNDELFGIVNPTTREWKDGLFSSIMREQANMPPG---NPKWIVLDGDIDPMWIESLNTLMDD 2507
            ||:|.|.|:|.::|.||||.||||:.::|:..:...|   ..:|||.|||:||.|:|:||:::||
  Rat  2255 KAISKDHLYGTLDPNTREWTDGLFTHVLRKIIDNVRGELQKRQWIVFDGDVDPEWVENLNSVLDD 2319

  Fly  2508 NKILTLASNERISLKREMRLLFEVGHLKAATPATVSRAGILYINPQDLGWSPYVSSWLETRVDMI 2572
            ||:|||.:.||:||...:|::|||..||.||.|||||.|:::.:...|.                
  Rat  2320 NKLLTLPNGERLSLPPNVRIMFEVQDLKYATLATVSRCGMVWFSEDVLS---------------- 2368

  Fly  2573 ERGILNALFEKYFPCLMQRQRDFRRITPITDMAMIQMTCHLLECLLDSDEGNADGRGRGSATGG- 2636
                                         |||........|....||..|..|..|.:|....| 
  Rat  2369 -----------------------------TDMIFNNFLARLRSIPLDEGEDEAQRRRKGKEDEGE 2404

  Fly  2637 -AANP-----------------------HSLHH----------------GEL------------- 2648
             ||:|                       .:|.|                |.|             
  Rat  2405 EAASPMLQIQRDAATIMQPYFTSNGLVTKALEHAFKLEHIMDLTRLRCLGSLFSMLHQACRNVAQ 2469

  Fly  2649 ---SHEAMVMALETI-------FVYATVWSFGSALSQDVIIDWHREFHKWWIGEFKDIKLPSQGT 2703
               :|....|.:|.:       .|||.:||    ||.|..:....|..: :|.....:.||:...
  Rat  2470 YNANHPDFPMQIEQLERYIQRYLVYAILWS----LSGDSRLKMRAELGE-YIRRITTVPLPTAPN 2529

  Fly  2704 --VFDYQLNVQTLKFQPWSELAAHQSLEGQIDSET---PLQNVLISTAETIRLAYFLKLLIDRNL 2763
              :.||::::.. ::.||      |:...||:.||   ...:|::.|.:|:|....|...:..:.
  Rat  2530 IPIIDYEVSISG-EWSPW------QAKVPQIEVETHKVAAPDVVVPTLDTVRHEALLYTWLAEHK 2587

  Fly  2764 ACMLVGNSGCGKG-AIFRQLFGQYANDQELLEVAVSAATAGDSSHQQQSGNPAGAVVVRRKASSS 2827
            ..:|.|..|.||. .:|..|  :...|.|::.:..|:||                          
  Rat  2588 PLVLCGPPGSGKTMTLFSAL--RALPDMEVVGLNFSSAT-------------------------- 2624

  Fly  2828 ATPLLTTVQATHFNFYTSSEIFQKMLDRPLEKK---SGRCYAPSGPKRRLIYFVNDLNMPEVDAY 2889
             ||                |:..|..|...|.:   :|...||....:.|:.|.:::|:|::|.|
  Rat  2625 -TP----------------ELLLKTFDHYCEYRRTPNGVVLAPVQLGKWLVLFCDEINLPDMDKY 2672

  Fly  2890 GTVQPHTIMRQFMDYRQWY---DRQRLQLKDIRHCQFAACMNPTA--GSFTIDPRLQRHFCVFSV 2949
            ||.:..:.:||.:::..:|   |:..::|:.|   ||....||..  |...:..|..||..|..|
  Rat  2673 GTQRVISFIRQMVEHGGFYRTSDQTWVKLERI---QFVGACNPPTDPGRKPLSHRFLRHVPVVYV 2734

  Fly  2950 APPGEDTLHHIYGSILSSHLE-SPSQGFTKEIRSIGSLLVRVGIALHRRVEYAFLPTALKFHYLF 3013
            ..||..:|..|||:...:.|. .||      :|:....|....:..:...:..|.... :.||::
  Rat  2735 DYPGPASLTQIYGTFNRAMLRLIPS------LRTYAEPLTAAMVEFYTMSQERFTQDT-QPHYIY 2792

  Fly  3014 NLRDLT----GIYQGLMNSVGAPASAGGGGASGFGGTICSRPSE------LMRLYVHEAFRVYHD 3068
            :.|::|    ||::.|                        ||.|      |:|::.|||.|::.|
  Rat  2793 SPREMTRWVRGIFEAL------------------------RPLETLPVEGLIRIWAHEALRLFQD 2833

  Fly  3069 RLVDPYDIKSFKSSIRDIFKKDFEDFDEDFVFAEPLIYSHFAQSLVDQKYMPLKSWDSLYQLLIE 3133
            |||:..:.:....:|..:..|.|.:.|::...:.|::||::    :.:.|:|:...:....:...
  Rat  2834 RLVEDEERRWTDENIDMVALKHFPNIDKEKAMSRPILYSNW----LSKDYIPVDQEELRDYVKAR 2894

  Fly  3134 AQASYNEVVGYMNLVLFEDAMIHVCRINRILESPRGNALLIGVGGSGKQTLARLAAFISSLNVSQ 3198
            .:..|.|.:. :.||||.:.:.||.||:||...|:|:.|||||.|:||.||:|..|:::.|:|.|
  Rat  2895 LKVFYEEELD-VPLVLFNEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVAWMNGLSVYQ 2958

  Fly  3199 IQIKRGFGLLDMREEIGNLYMKVGLKNLASVFLISDAQIPDESILMLINDLLASGEIPELFNDDQ 3263
            |::.|.:...|..|::..:..:.|.||....|::.::.:.|...|..:|.|||:||:|.||..|:
  Rat  2959 IKVHRKYTGEDFDEDLRTVLRRSGCKNEKIAFIMDESNVLDSGFLERMNTLLANGEVPGLFEGDE 3023

  Fly  3264 LDTITNGIRNEVKQSG-TLDTKENCWRYFVEKVRRLLKVVLCFSPVGQTLRVRARKFPAIISRTA 3327
            ..|:....:...::.| .||:.|..:::|..:|.|.|.||...:|..:.|:.||...||:.:|..
  Rat  3024 YATLMTQCKEGAQKEGLMLDSHEELYKWFTSQVIRNLHVVFTMNPSSEGLKDRAATSPALFNRCV 3088

  Fly  3328 IDWFHEWPKSALESVSQKFLNEIN----GILEPALVPPI----------------GCFMAYVHGT 3372
            ::||.:|...||..|.::|.::::    ..:.|..:|.:                .|  .:||.|
  Rat  3089 LNWFGDWSTEALYQVGKEFTSKMDLEKPNYIVPDYMPVVYDKLPQPPTHREAIVNSC--VFVHQT 3151

  Fly  3373 VNQISRIYLQNEKRYNYTTPKTFLEYIFLYRKLLVDKNGEFAERIARLQSGMSKLAECARQVDTL 3437
            ::|.:....:...|....||:.:|::|..|..|..:|..|..|:...|..|:.|:.|...||:.|
  Rat  3152 LHQANARLAKRGGRTMAITPRHYLDFINHYANLFHEKRSELEEQQMHLNVGLRKIKETVDQVEEL 3216

  Fly  3438 KHQLAIQEVQLAAKNAAA-DKLIVIVSAESEKVKRERYIASEEEKRVRIIEEDVSIKTKMCEEDL 3501
            :..|.|:..:|..||||| |||..:|. :.::.::::.::.|.::::...:|.::.|....:|||
  Rat  3217 RRDLRIKSQELEVKNAAANDKLKKMVK-DQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDL 3280

  Fly  3502 RQAEPALVAAQAALNTLNKNNLTELKSFGSPPKAVVNVCAAVMVLLASNGKIPRDRSWKASKLMM 3566
            .:.|||::.||.|:.::.|.:|.|::|..:||.||.....::.:||   |:...|  ||..:.::
  Rat  3281 DKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLL---GESTTD--WKQIRSII 3340

  Fly  3567 VRVDQFLNDLLNYNKDNIHPNIIETLQE-YLKDPEFNPDKVVQKSVAAAGLCAWVINLHRYHQVF 3630
            :| :.|:..::|::.:.|...|.|.::: |:.:|.:|.:.|.:.|:|...:..|.|....|..:.
  Rat  3341 MR-ENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLACGPMVKWAIAQLNYADML 3404

  Fly  3631 LIVGPKQQALQDSHQELLEARERLQYLKAKINNLEAKLAEIQAEFENAVGEKQRCQREADKTAFT 3695
            ..|.|.:..||....:..:.:::...::..|.:|||.:|..:.|:...:.|.|..:.:.......
  Rat  3405 KRVEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQAIKADLAAVEAK 3469

  Fly  3696 IDLAHRLVNGLANENVRWKESVQSLLAKIGTLPGDILLISSFLSYVGCFTRRYREEL----QHKM 3756
            ::.:..|:..|:.|..||:::.::...::.|:.||.||.::|::|.|.|.::.|:.|    .|.:
  Rat  3470 VNRSTALLKSLSAERERWEKTSETFKNQMSTIAGDCLLSAAFIAYAGYFDQQMRQNLFTTWSHHL 3534

  Fly  3757 WLPN--FRKIDPHIPHTEGVDTLALFSDDAQIAAWNNEGLPMDRMSTENATILQYSTRWPLMIDP 3819
            ...|  ||        |:...|..|.:.|.:: .|....||.|.:.||||.:|:...|:||:|||
  Rat  3535 QQANIQFR--------TDIARTEYLSNADERL-RWQASSLPADDLCTENAIMLKRFNRYPLIIDP 3590

  Fly  3820 QLQGIKWIKNRFGTDLVVLR--LRQKGFLEALEKSISQGDTVLIEQIEESMDTVLEPLLSRALIK 3882
            ..|..::|.|.: .|..:.|  .....|.:.||.::..|:.:|::.: ||.|.||.|:|:|.:.:
  Rat  3591 SGQATEFIMNEY-KDRKITRTSFLDDAFRKNLESALRFGNPLLVQDV-ESYDPVLNPVLNREVRR 3653

  Fly  3883 KGR--YLRIGDKEIEFHASFRLILHTKMANPHYKPEMQAQTTLINFTVTPDGLEEQLLAEVVKIE 3945
            .|.  .:.:||::|:...||.:.|.|:.....:.|::.::.|.:|||||...|:.|.|.||:|.|
  Rat  3654 TGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDLCSRVTFVNFTVTRSSLQSQCLNEVLKAE 3718

  Fly  3946 RPDLEQMKTEVTVQQNKFKISLKALEDELLARLASSGENVLDDHALVINLENTKRTVDEIEAKVR 4010
            |||:::.::::...|.:|::.|:.||..||..|......:|||..::..|||.||...|:..||.
  Rat  3719 RPDVDEKRSDLLKLQGEFQLRLRQLEKSLLQALNEVKGRILDDDTIITTLENLKREAAEVTRKVE 3783

  Fly  4011 EARVTTLQIDDTRNIYRSAAKRAAILYFVLTDLSRINPIYKFSLKSFMNVFRQAIAMAAESK--- 4072
            |..:...:::.....|...:...:.:||.:..|.:::.:|::||:.|::::...:......|   
  Rat  3784 ETDIVMQEVETVSQQYLPLSTACSSIYFTMESLKQVHFLYQYSLQFFLDIYHNVLYENPNLKGAT 3848

  Fly  4073 NYEKRVLHLVESITLQTYRYTLRGLFEADKLTFTSHMTLRILIAAEQV--AKDETDFLLRFPH-- 4133
            ::.:|:..:.:.:....:....||:...|      |:|..:|:|..::  ...|..:...|.|  
  Rat  3849 DHTQRLSVITKDLFQVAFNRVARGMLHQD------HITFAMLLARIKLKGTMGEPTYDAEFQHFL 3907

  Fly  4134 ---------------DPTTLSPLDFVGR-SAWGGIKSL---TLIEHFYGIDKDMENYTKRWRKFM 4179
                           ...|:...:.|.| |.....|.|   ...:..:||          |   :
  Rat  3908 RGKEIVLSAGSTPKVQGLTVEQAEAVARLSCLPAFKDLIAKVQADEQFGI----------W---L 3959

  Fly  4180 ASDTPEREQFPGEWKHRTP-------LQKLCIIRSLRPDRMTYAMRQFVEQTMGRSYAEIQTPPF 4237
            .|.:|| :..|..|...||       :.:|.:|::.||||:......||...:|.|:..|...|.
  Rat  3960 ESSSPE-QTVPYLWTEETPATPIGQAIHRLLLIQAFRPDRLLAMAHMFVSTNLGESFMSIMEQPL 4023

  Fly  4238 G---AIFQELNAATPAFFILSPGVDPIRDVERYGQRQGFHSESDTLVNISLGQGQEL-LAEQAII 4298
            .   .:..|:...||......||.|....||.....|     :..:.:|::|..:.. .|::||.
  Rat  4024 DLTHIVGTEVKPNTPVLMCSVPGYDASGHVEDLAAEQ-----NTQITSIAIGSAEGFNQADKAIN 4083

  Fly  4299 GALESGQQWVILQNIHLVVNWLPTLEKLIERIVLQSESKGESNFRLFISAEPAPDPQYHVIPQGI 4363
            .|::|| :||:|:|:||...||..|||.:..:      :..:.||||::.|..|.     :|..:
  Rat  4084 TAVKSG-RWVMLKNVHLAPGWLMQLEKKLHSL------QPHACFRLFLTMEINPK-----VPVNL 4136

  Fly  4364 LESSLKVVNEPPSGMAANLHKAWDNFSQDALETCTQEAEFKSILFALCYFHAVAGERRKFGPQGW 4428
            |.:....|.|||.|:.||:.:.:.:.....:  |....|...:.|.|.:||||..||.::.|.||
  Rat  4137 LRAGRIFVFEPPPGVKANMLRTFSSIPVSRM--CKSPNERARLYFLLAWFHAVIQERLRYAPLGW 4199

  Fly  4429 NKVYPFNIGDLTISSNVLHNYLEGS---------NRIPWEDLRYLFGEIMYGGHITDDWDRRLCQ 4484
            :|.|.|...||..:.:.:..:|:.:         ::|||..|:.|..:.:|||.:.:::|:||..
  Rat  4200 SKKYEFGESDLRSACDTVDTWLDDTAKGRQNISPDKIPWSALKTLMAQSIYGGRVDNEFDQRLLN 4264

  Fly  4485 TYLEELLQQDLIDGDFELC------PGFPAPPNLDFEGYHSYITEMLPE-ESPLLYGLHPNAEIG 4542
            |:||.|......|.:|:|.      .....|..:..|.:..:: |:||: ::|...||..|||..
  Rat  4265 TFLERLFTTRSFDSEFKLACKVDGHKDIQMPDGIRREEFVQWV-ELLPDAQTPSWLGLPNNAERV 4328

  Fly  4543 FLTTASEQLLRTIFELQPRESE--------------LSSHCGAPR-EELVKIMIDDFLDKLQDEF 4592
            .|||....::..:.::|..|.|              .|:..|.|. ...:.....::|..:..  
  Rat  4329 LLTTQGVDMISKMLKMQMLEDEDDLAYAETEKKTRTDSTSDGRPAWMRTLHTTASNWLHLIPQ-- 4391

  Fly  4593 NLQALLNRVER-KTPFVVVALQECERMNALIREIKRSLRELMLGLRGELTITQEMERLDHAIFYD 4656
            .|..|...||. |.|......:|.:....|::::::.|.:::....|:...|..:..|.:.:...
  Rat  4392 TLSPLKRTVENIKDPLFRFFEREVKMGAKLLQDVRQDLADVVQVCEGKKKQTNYLRTLINELVKG 4456

  Fly  4657 HVPAAWARLAYPSMLGLQSWFADLLHRIKEL--------AGWLNDFKLPCAIWLGGLFNPQSFLT 4713
            .:|.:|:....|:.:.:..|.:|...|||:|        ||...:.| ...:.|||||.|::::|
  Rat  4457 ILPRSWSHYTVPAGMTVIQWVSDFSERIKQLQNISQAAAAGGAKELK-NIHVCLGGLFVPEAYIT 4520

  Fly  4714 AIMQESARKHDLPLDRMLISCDVTKKQKDDVTLPPMEGAFVHDLYMDGASWDCQLNSIVALRPKE 4778
            |..|..|:.:...|:.:.:..:||..|  ..||...... |..|.:.||:  |..|.:..  ...
  Rat  4521 ATRQYVAQANSWSLEELCLEVNVTASQ--STTLDACSFG-VTGLKLQGAT--CSNNKLSL--SNA 4578

  Fly  4779 MLCAMPVIYIKSIVQEKQELQ-RVYECPLYKTRSRGN-TYVWTFNLKTRERPSRWILGGVALL 4839
            :...:|:..::...|...|.: .|...|:|...:|.: .:...|.:.|:|.|..:...|||:|
  Rat  4579 ISTVLPLTQLRWGKQTSAEKKASVVTLPVYLNFTRADLIFTVDFEIATKEDPRSFYERGVAVL 4641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3339NP_001036762.2 DHC_N1 276..903 CDD:285571 135/698 (19%)
DHC_N2 1535..1944 CDD:285579 112/411 (27%)
P-loop_NTPase 2095..2324 CDD:304359 128/259 (49%)
P-loop_NTPase 2409..2544 CDD:304359 62/138 (45%)
P-loop_NTPase 2731..3061 CDD:304359 78/352 (22%)
P-loop_NTPase 3138..3406 CDD:304359 87/288 (30%)
MT 3419..3759 CDD:289543 89/345 (26%)
AAA_9 3789..4001 CDD:289547 73/215 (34%)
Dynein_heavy 4142..4832 CDD:281078 185/746 (25%)
Dync1h1NP_062099.3 Stem. /evidence=ECO:0000250 2..1865 427/2079 (21%)
DHC_N1 238..830 CDD:285571 142/738 (19%)
Interaction with DYNC1I2. /evidence=ECO:0000269|PubMed:10893223 446..701 47/271 (17%)
Interaction with DYNC1LI2. /evidence=ECO:0000269|PubMed:10893223 649..800 37/204 (18%)
DYN1 1044..4327 CDD:227570 961/3575 (27%)
DHC_N2 1321..1719 CDD:285579 112/407 (28%)
P-loop_NTPase 1866..2103 CDD:304359 126/236 (53%)
AAA 1. /evidence=ECO:0000250 1866..2097 123/230 (53%)
AAA 2. /evidence=ECO:0000250 2178..2450 90/316 (28%)
P-loop_NTPase 2217..2357 CDD:304359 63/139 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2389..2409 7/19 (37%)
AAA 3. /evidence=ECO:0000250 2554..2803 68/303 (22%)
P-loop_NTPase 2565..2826 CDD:304359 74/339 (22%)
AAA 4. /evidence=ECO:0000250 2897..3166 81/271 (30%)
P-loop_NTPase 2907..3185 CDD:304359 85/279 (30%)
Stalk. /evidence=ECO:0000250 3187..3498 80/317 (25%)
MT 3199..3530 CDD:289543 88/337 (26%)
AAA 5. /evidence=ECO:0000250 3551..3780 77/231 (33%)
AAA_9 3559..3774 CDD:289547 73/216 (34%)
Dynein_heavy 3920..4630 CDD:281078 185/753 (25%)
AAA 6. /evidence=ECO:0000250 4003..4219 67/234 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5245
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100025
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.710

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