DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3339 and dhc-4

DIOPT Version :9

Sequence 1:NP_001036762.2 Gene:CG3339 / 43295 FlyBaseID:FBgn0039510 Length:4842 Species:Drosophila melanogaster
Sequence 2:NP_001338793.1 Gene:dhc-4 / 189209 WormBaseID:WBGene00012272 Length:2727 Species:Caenorhabditis elegans


Alignment Length:3255 Identity:578/3255 - (17%)
Similarity:1060/3255 - (32%) Gaps:1052/3255 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1128 VENNFQQI------VEQLLLDIKQTCDCMPRI-----VADNAPSEDDEDDDTATVDYEQELRWEP 1181
            ||.:||::      .|::..::::..||..|.     |||.  .:....|:.|.::..::.....
 Worm    99 VEWSFQRVHKLSPKNERIAQELEELMDCAERYALIENVADG--YQKRVKDELARLNKIEKYHHHV 161

  Fly  1182 RED-----RAQELQERK-------KKDLELE-QEQGDPKPQAV---QFNLLAAAKA--YSQKMEC 1228
            :.:     |:|.|...|       :|.|..| .|..||:...:   :|..:...|.  :||::  
 Worm   162 KNNREILLRSQSLAAMKIRIFFENRKGLIFEVNELIDPEVGNIPIKKFREVTLTKVLEFSQEI-- 224

  Fly  1229 TADGLEMLERAIRDALADTVA-------AASAYAAKFQAY--------AF-----------LWT- 1266
               .:::|::..||.....:.       ..:|.....|||        ||           ||. 
 Worm   225 ---NMKLLKKNWRDEKKRNIVQNCIVQETTNAAFGTIQAYLKTLRNKPAFLSIDCMIVDRKLWVN 286

  Fly  1267 --------QQSSEVLAA--------------------CMQTAREQ--THHVSAGGYAIMETFKKE 1301
                    ::...|:.|                    |::....:  .||.....||.:      
 Worm   287 SEQIRLLLKEPISVMCALENVRMSTEDCETWQEEAMICVEVLSHELIVHHPFIQPYAFL------ 345

  Fly  1302 IENY--------NEVHDAIDQCENRECINGWLALDIKPLKYGLLNLACKWSHMCKKWLLRYVQGT 1358
            |::|        .|:....|...:.: |....|:.:..::..:|.|...||.:.::     ::..
 Worm   346 IDDYKVSPKLTEEELIKMYDDSTHLQ-IRLTKAVKLLTIRCFVLRLESVWSEVDRR-----IRSF 404

  Fly  1359 LKELNAFIARGFETLQLHIARQDFATLLRVLAIMS-----------------------EIREREP 1400
            ..:|...|.|.|.|| |:....||....|.|...|                       .:|:...
 Worm   405 RNQLKMAIRRKFTTL-LNKLLHDFRKYDRALQYRSIDPSMMLSNKAQVDLMLQNEIGDSVRQFVE 468

  Fly  1401 YADNVFKPLKEIMGLLKTYNVEFEPQLLRGIEQLPQ-----------QWQQLKHSSTVKQEALQD 1454
            ..|.||:..:.|.  |.|..::...||......|||           :.....|..|.||..:..
 Worm   469 VYDKVFEITQHIS--LDTSQLDTLLQLASLRLSLPQCINDHAHFFQKRISTFLHFVTKKQSKVMS 531

  Fly  1455 T--RFHQQQRVTALIGLHTCHLQHYARQFQKMPFFRVPCPQVYDVCDEVYLRLHRFRRQQRLYTR 1517
            .  :..::.::...:| :...:.:|..|..|:.      |.:.::..|:. .|::|.        
 Worm   532 NVQKAMEKLKIVQTMG-NPQEVDNYLTQMAKLR------PMLDNLITEIE-DLNKFE-------- 580

  Fly  1518 WARLLDIQPPDPATLQFCEVELRRVKQLWDFVRVIESCIVAWHATPWLLIDTDDMEHECKKFTRD 1582
              ..:|||..|...::....|:..::.|::........:.|:..:...|::.|...:...:||..
 Worm   581 --TAVDIQVSDVTKMRHFVGEIGSLQSLFEATSGYYKHVNAFFESRRTLVNIDASRNFIDQFTIQ 643

  Fly  1583 LRTLDKCIREWAPYVHIVGVLRELVASLR---AITELQN-PAITERHWMELMQLTKLSYKCNKST 1643
            |...:..:.......|.:...|..|.:.:   |:.|:.: ..:.:.||:.:.::.........::
 Worm   644 LSIFESSLTTHRAAKHFIAYARNEVDAFKKNFAVAEVMSCRRLLDAHWLRMSEIVGFDLTPYANS 708

  Fly  1644 RLAQLLTLQLQHHEEDIKNTVDRAIKEMTVTKVLDEIKATWAHLEFELEQHHTRPHIQLLKVSEE 1708
            .:||:..|.|:.|.:.:|.....|.:|.|....|..|...|:....|:     |.::| .|:|  
 Worm   709 SIAQICELGLEAHLQQLKPIAFSAEREATAADQLHAIVTFWSQEPLEM-----RCYVQ-WKLS-- 765

  Fly  1709 LIETLDDNQMQLQN-ISTSKH---IEYLL-DKLTHWQKVLGGIDTLIVNWFEVQRKWIYLECIFI 1768
            |...|.:...::|| |:|.||   :|.:. |.|..|.:.....:.::..|.|.|:||:.:..||:
 Worm   766 LALKLSELHHRVQNDINTLKHMTNVEQITDDSLPQWIEWTARAEKILKAWCETQQKWMRVANIFV 830

  Fly  1769 GSADIRAQLPADAANFERIDEDFTALLAKVQEVRVVMQVVLRHDDVLAQLLQLQH---------- 1823
            ...|             .:.:::..|....:....:.:.||: |:.:.:::||.|          
 Worm   831 TCRD-------------TLQKEYELLRTCAKYFIKIERNVLK-DETIYRVMQLPHLPCWIQKINS 881

  Fly  1824 RLAVCEKALNDYLETKRLAFPRFYFISAADLLDILSNGNNPQVIDRHLIKLFDSILRLQYETNTP 1888
            .:::..:.:...|:..|:...|....|...||::.|..:....:...|...|.|:.||.:  |..
 Worm   882 MVSIIIQGVRGLLDGMRMNNARLCLSSEVHLLNLFSTTSIETRLKLLLKDCFPSLRRLCF--NRR 944

  Fly  1889 NALGMHSKENDEYVPFVSFDPDQPAFIVCGGRVELWLRAIIQQMRSTLHELFRRALRVFGEKPRE 1953
            |.|.|.....::..                  |:|....|..|...   ||.|...:.|..|..:
 Worm   945 NQLEMVDLLEEKVT------------------VDLTKSEIESQEPC---ELIRSIEQAFASKLTD 988

  Fly  1954 LWLYDWPAQVALCCSQISWTADVNRSFGCMEEGYEGVMKELHKRQIAQLNALINLLLGELSPGDR 2018
            :..|:                ..:||......|          ..:|:|                
 Worm   989 IITYE----------------RQDRSKAASRVG----------ANVAEL---------------- 1011

  Fly  2019 QKIMTICTIDVHSRDVVGKIIASKVDNSLAFQWQSQLRHRWDDDQAGSSSGRASTAISCGGGDED 2083
                      :.:|..:..:..|:|:.:...|.:|..|.                          
 Worm  1012 ----------IETRQTLDPLFLSRVEKTYYIQHRSVQRQ-------------------------- 1040

  Fly  2084 CFANICDAEFRYAYEYLGNTSRLVITPLTDRC---YITL-------TQSLRLRLAGATAGPAGTG 2138
               ::...:|.|:.|    .:|.:...|.|..   :|.|       |:|..||||.....     
 Worm  1041 ---SLLTVDFVYSTE----INRFIPRSLADSWSSGHIVLLIGEMCSTRSFVLRLANCMCS----- 1093

  Fly  2139 KTETTKDLGRALGVMVYVFNCSEQMDYKSCGNIYKGLAQTGAWGCFDE-----FNRICVEVLSVV 2198
                          .:.:.|..:.::......:.||:|.: :|....|     .:::..::..::
 Worm  1094 --------------NLRIVNSHQLLEPAFLERVTKGIAMS-SWFVLLENVDLLDSQLIFKLFKIL 1143

  Fly  2199 AVQVKTIQEAIKMHKTQF--IFMGE----------RISLEPSVGI---FITMNPGYAGRT----- 2243
            |.||           |.|  :|:..          .|::| .:|:   |:.::|.:...|     
 Worm  1144 ASQV-----------TSFPRLFLSSTDEIKNQLPTNIAVE-HLGVFHEFVEVSPAFKFETSPLSS 1196

  Fly  2244 -------ELPENLKTLFRPCAMIVPDFALICEIMLMAEGFQDARLLARKFITLYTLCKELLSKQD 2301
                   :||..|.:..:|.:.  |...|:.:|        .|::..|:.    :.|...|:|: 
 Worm  1197 VRTSSIPKLPAQLVSTGQPPSS--PHSVLLEKI--------GAKIRNREI----SGCVGSLAKE- 1246

  Fly  2302 HYDWGLRAIKSVLVVAGTLKRDDHSRPEDQVLMRALRDFNIPKIVTEDVPIFMGLIGDLFPALDV 2366
                             |||....:.||              ||:.....:|:         .|.
 Worm  1247 -----------------TLKETLQNFPE--------------KIIWVYTDVFV---------RDQ 1271

  Fly  2367 PRKRVFEFEKTIRRAVNEIKLQPEEGFLMKVVQLQELLDVRHSVFIVGNAGTGKTKIWQTLRETY 2431
            ...|..||..|            :.|.|.:|:          |....||.|:...:.:.:...|.
 Worm  1272 MVTRSDEFAAT------------QSGILFEVL----------SPATTGNGGSDSERSYHSTISTS 1314

  Fly  2432 RIQKLKPVCHVLNPKALSND-----ELFGIVNPTTREWKDGLFSSIMREQANMPPGNPKWIVLDG 2491
            .:        .:|...:...     .:|..::|...: |||.       .|..||    ::.|| 
 Worm  1315 SV--------TINTIVVFYGFSEFWNIFPFISPLFLK-KDGY-------SAQTPP----FLTLD- 1358

  Fly  2492 DIDPMWIES---------------LNTLMD-DNKILTLASNERISLKREMRLLFEVGHLKAATPA 2540
            |....|.:.               |||:.. |.....:..|.::.:.|..|   :|.|.|..  .
 Worm  1359 DGSTYWPQENVQFLMCIPDEEGFHLNTVKKFDIPFHVVNENLKMDVARSWR---KVWHKKYT--E 1418

  Fly  2541 TVSRAGILYINPQ--DLGWSPYVSS------WLETRVDMIERGILNALFEKYFPCLMQRQRDFRR 2597
            ..::..::.|..:  |...||..|.      |..|...:|...:...:             ...|
 Worm  1419 LFNKISLVEIMDELVDRILSPMASHFKSTFLWPSTLFQVIYHDLTEVI-------------PTSR 1470

  Fly  2598 ITPITD---MAMIQMTCHLLECLLDSDEGNAD---GRGRGSATGGAANPHSLHHGELSHEAMVMA 2656
            ||.:.|   :.::..|.:.:....| |:|..:   ||..|:                        
 Worm  1471 ITSVNDTLRITVVLATANFISIFAD-DQGKVEKYMGRALGA------------------------ 1510

  Fly  2657 LETIFVYATVWSFGSALSQDVIIDWHREFHKWWIGEFKDIKLPSQGTVFDYQLNVQ-TLKFQPWS 2720
                                             |.|...|::|..  :.:::::.| ..|...|.
 Worm  1511 ---------------------------------IREKLSIQMPDD--ICNWKISYQDATKLVRWE 1540

  Fly  2721 ELAAHQSLEGQIDSETPLQNVLISTAETIRLAYF-LKLLID-RNLACMLVGNSGCGKGAIFRQLF 2783
            :....||   .||.::.:.|::|.|....||.:: ::||.. .|:   ||......:..:|.::.
 Worm  1541 DEPFCQS---SIDKDSAIGNIMIVTPNMDRLLFYSIRLLASGHNI---LVHGPPYSRKTMFVKMI 1599

  Fly  2784 GQYANDQELLEVAVSAATAGDSS-------HQQQSGNPAGAVVVRRKASSSATPLLTTVQATHFN 2841
            .::.           ::|.||.:       .:.:.||.    |.::|.:.    ::.|.:..|  
 Worm  1600 SKFL-----------SSTVGDLTVEFLWLDGKSRVGND----VAQKKFAD----VVGTCERAH-- 1643

  Fly  2842 FYTSSEIFQKMLDRPLEKKSGRCYAPSGPKRRLIYFVNDLNMPEVDAYGTVQP-HTIMRQFMDYR 2905
                                         :.:.:|.|       :|.:...:| ..|:..|:|::
 Worm  1644 -----------------------------QSKQLYIV-------IDRFSFTEPLLPIIEFFVDHK 1672

  Fly  2906 QWYDRQRLQLKDIRHCQ----------------------------FAACMNPTAGSFTID-PRLQ 2941
            .::       ||.:.|.                            |.....|.:..|... |.:|
 Worm  1673 TYW-------KDGKLCNSDAQIRMIIITDEEDYAWLHKTKALASTFVGIAMPASTKFKDQKPLVQ 1730

  Fly  2942 RHFCVFSVAPPGEDTLHHIYGSILSSHLESPSQGFTKEIRSIGSLLVRVGIALHRRVEYAFLPTA 3006
            ........|.......|||..|..|..:|...:.:.:.:.|:.                  |.|.
 Worm  1731 SLIAANFTAKSFSSEYHHILESFSSCIVEIVRKPYVENLSSMA------------------LATR 1777

  Fly  3007 LKFHYLFNLRDLTGIYQGLMNSVGAPASAGGGGASGFGGTICSRPSELMRLYVHEAFRVYHDRLV 3071
            |...:.|...|                             .|..|..|:||::||:.||..| .:
 Worm  1778 LAKSFFFAFPD-----------------------------NCPDPDALLRLFIHESARVIGD-AI 1812

  Fly  3072 DPYDIKSFKSSIRDIFKKDFED-FDEDFVFAEPLIYSHFAQSLVD-------QKYM--PLKSWDS 3126
            ||..        |..|.:.||. .||:|..|...|..|.||...:       :|.|  .|..:|.
 Worm  1813 DPIH--------RATFAQQFETLIDENFNTAFQAILKHIAQISEEEEEEEGVEKRMTASLDMFDL 1869

  Fly  3127 LYQLLIEAQA-------SYNEVVGYMNL------VLFEDAMIH----------------VCRINR 3162
            :|.   |..|       :|..||..:..      .|||....|                |.|:.|
 Worm  1870 IYS---EVDAHDVVDGLAYEPVVDRVQFQRSIENFLFEHHRNHTKDRVRLFVDWETSGWVQRVMR 1931

  Fly  3163 ILESPRGNALLIGVGGSGKQTLARLAAFISSLNVSQIQI----------------KRGFGLLDMR 3211
            ::.....:.:|.....||:..:.:.|....:..:..:|:                .|...::...
 Worm  1932 VIRQASEHMVLTAPPNSGRTQVVKAACVACNATMMHMQVDATCYDTFISRWEYALSRAINIIANT 1996

  Fly  3212 EE-------IGNLYMKVGLKNLASVFLISDAQIPDESILMLINDLLASGEIP---ELFNDDQLDT 3266
            .:       :...|.||..:.:             |.|.:.|       |.|   .|.:|:||.|
 Worm  1997 NQHVVILVHLDFCYEKVEPRWM-------------EQIKLWI-------ECPNTQHLVSDEQLHT 2041

  Fly  3267 ITNGI----RNEVKQSGTLDTKENCWRYFVEKVRRLLKVVLCFSPVGQTLR--VRARKFPAI--- 3322
            :...:    :|...|..|:..     |...:::.:.|.|.....|  |.||  :.||.|.|:   
 Worm  2042 MGEQLIECEKNLATQMQTIGL-----RLPGQRMCKYLPVETLKEP--QALRKVLEARIFDALHVM 2099

  Fly  3323 -----ISRTAIDW---FH--EWPKSALESVSQKFLNEINGILEPALVPPIGCFMAYVHGTVNQIS 3377
                 ..:|...|   ||  ...||.|.|...|.:::..  ::.|....:..|.         |.
 Worm  2100 FLVDPQFKTDFSWCTIFHVPTIEKSELLSKVSKIISDCK--VDEAAQIIVSTFF---------IV 2153

  Fly  3378 RIYLQNEKRYNY-TTPKTFLEYIFLYRKLLVDKNGEFAERIARLQSGM------SKLAECARQVD 3435
            :.|||:.....| |......|....::.:..::..|......||...:      .||||..::||
 Worm  2154 KKYLQSIGIALYGTVFSQLFEVADCFQIVFREQKKELVAEGTRLNEALHTCEQIEKLAEMGKEVD 2218

  Fly  3436 TLKHQLAIQEVQLAAKNAAADKLIVIVSAESEKVKRERYIASEEEKRVRIIEEDVSIK-----TK 3495
                   |:.||         :.||.......|:.|||   :.:..|:.::.|.|::|     |.
 Worm  2219 -------IEAVQ---------RRIVEKETMLSKMNRER---NTKGARMEVLSELVAVKATNLETM 2264

  Fly  3496 MCEE-DLRQAEPALVAA-----QAALNTLNKNNLTELKSFGSPPKAVVNV---CAAVMVLLASNG 3551
            ..|| .|:....|:|:|     :..:..|.|.:.|::|:.....|..|.:   |..:..:...|.
 Worm  2265 RAEEAALKTTVEAMVSAPQEEFRKCVEELLKFSNTDIKTLSKITKPSVGIRLCCEMLRTIFEPNF 2329

  Fly  3552 KIPRD--RSWKASKLMMVRVDQFLNDLLNYNKDNIHPNIIETLQEYLKDPEFNPDKVVQKSVAAA 3614
            |..|.  .:|..| |..|....|...|...:.|.:..:.::.|::|:...|||.:|:..:||..|
 Worm  2330 KPKRHAAEAWTES-LKFVSDKAFFIKLATCDADILTVDQMKVLKKYVDRAEFNANKIEHESVVCA 2393

  Fly  3615 GLCAWVINLHRYHQVFLIVGPKQQALQDSHQELLEARERLQYLKAKINNLEAKLAEIQAEFENAV 3679
            .||.|:       ..||.:....:.:::..:|..|.||.::              :.:..|||..
 Worm  2394 CLCRWI-------GAFLELACTLRVMEEQVEESKELREHIR--------------QTEVRFENES 2437

  Fly  3680 GEKQRCQREADKTAFTID-----LA-------HRLVNG-----LANENVRWKESVQSLLAKIGTL 3727
            .|.|:.:.:.:|....|.     ||       :||.:|     |.....|||..::....|...|
 Worm  2438 SEMQQLKSDVEKLTVLIRENEQVLANDRRLCDYRLRSGDLLAALEPHRKRWKSQLKQNEKKQKEL 2502

  Fly  3728 PGDILLISSFLSYVGCFTRRYREELQHKMWLPNFRKIDPHIPHTEGVDTLALFSDDAQIAAWNNE 3792
            .|:.||.:...:::.|                           .|...||...|.........|.
 Worm  2503 VGNTLLFAIHRAHLLC---------------------------QEKAVTLICVSMCTSHLTSQNV 2540

  Fly  3793 GLPMDRMSTENA-----TILQYSTRWPLMI---DPQLQGIKWIKNRFGTDLVV---LRLRQKGFL 3846
            .......|:.|.     ..|:.|.|:.|.:   |..||.::.:... .|.|.:   |..::....
 Worm  2541 QFDSSMASSSNVINRILRTLKSSRRFCLFLSTTDSLLQNVRSVLPG-ATYLDISPPLTWKEPQMA 2604

  Fly  3847 EALEKSISQGDTVLIEQIEESMDTVLEPLLSRALIKKGRYLRIGDKEIEFHASFRLILHTKMANP 3911
            .:|:|.:..    ::..:..::..|..|.:...|:|.      .:||:.:               
 Worm  2605 VSLQKHVYS----IVPTVFYNLTEVPPPEMYEILMKS------EEKEVCY--------------- 2644

  Fly  3912 HYKPEMQAQTTLINFTV-----TPDGLEEQLLAEVVKIERPDLEQMKTEVTVQQNKFKISLKALE 3971
            |.||.......|..|..     .||.:.:  |.||:.:..| ||.::....:::|:    |.:|.
 Worm  2645 HNKPLELPDDILFVFVAKNLGHIPDQIRK--LMEVIVVSIP-LEPIEDREKIERNE----LSSLL 2702

  Fly  3972 DELLA 3976
            .|..|
 Worm  2703 GEFTA 2707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3339NP_001036762.2 DHC_N1 276..903 CDD:285571
DHC_N2 1535..1944 CDD:285579 82/427 (19%)
P-loop_NTPase 2095..2324 CDD:304359 46/270 (17%)
P-loop_NTPase 2409..2544 CDD:304359 28/155 (18%)
P-loop_NTPase 2731..3061 CDD:304359 55/368 (15%)
P-loop_NTPase 3138..3406 CDD:304359 61/335 (18%)
MT 3419..3759 CDD:289543 85/378 (22%)
AAA_9 3789..4001 CDD:289547 39/204 (19%)
Dynein_heavy 4142..4832 CDD:281078
dhc-4NP_001338793.1 DHC_N2 599..990 CDD:369852 84/435 (19%)
SMC_prok_A <2413..>2502 CDD:274009 21/102 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5245
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.