DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3339 and Dync1h1

DIOPT Version :10

Sequence 1:NP_001036762.2 Gene:CG3339 / 43295 FlyBaseID:FBgn0039510 Length:4842 Species:Drosophila melanogaster
Sequence 2:NP_084514.2 Gene:Dync1h1 / 13424 MGIID:103147 Length:4644 Species:Mus musculus


Alignment Length:418 Identity:81/418 - (19%)
Similarity:119/418 - (28%) Gaps:161/418 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ICPGNRLKIIQ-SHDSG-----CFTLS--------------------PASSPCPTIDSTTNLNSP 93
            |||.....:.| :|.:|     |...|                    .||||.|:.:||....||
Mouse    46 ICPIQTTSVRQATHKNGDINGSCMRPSASQGNSQPESISEQQQAAPLAASSPSPSTNSTQKKKSP 110

  Fly    94 IPSEIYENTSLCSSTSAGSQRQGKRRSWHIMPNKVLTPQKCGDVYLYDLLP--PSSGRASNA--- 153
            ..:.....|.:.|.......::.::.:.....|.....:.|.     |..|  |:|.|...|   
Mouse   111 SSNGSSTATPVISKQIFPWMKETRQNAKQKSTNCPAAGETCD-----DKSPPGPASKRVRTAYTS 170

  Fly   154 ---------FHHHQQQQQHHSADVLDTADHTGSRV-------RSAPSPQPHVLGIPHPDVPPAVR 202
                     ||.::...:....::.:..:.|..::       |..........||.|        
Mouse   171 AQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGIMH-------- 227

  Fly   203 SGSPAGRAPALSRLAFRAVVAVYHHHHPHLATGGYRMEESYDVPRPLLSQQQHLTPSSSNSSLLT 267
              ||.|.:|..|                                 |.||...|:           
Mouse   228 --SPLGHSPDRS---------------------------------PPLSGSNHI----------- 246

  Fly   268 SDSFSLSSSNRSSLANMPDYDVPRRNPVSVRSTPPPPATP-----GPQSGTAPPG--------TP 319
              .:|....|.:||:    ||.|         :||..|.|     |..:.|||.|        .|
Mouse   247 --GYSGQLPNVNSLS----YDAP---------SPPSFAKPQQNIYGLAAYTAPLGGCIPQQKRYP 296

  Fly   320 SFTASHHSM-SMSSFSSMSTYDVPPSHGG---------GPGYVSAKLHQQQTA------------ 362
            .....|||| ...||::.:....|...||         ||.:....|....:|            
Mouse   297 GTEYDHHSMQGNGSFANANLQSSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAAQIPG 361

  Fly   363 -----PATPKELPLELSSALETLARLQN 385
                 |..|.....:|||...:..|||:
Mouse   362 NHHHGPCDPHPTYTDLSSHHASQGRLQD 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3339NP_001036762.2 DHC_N1 279..903 CDD:462457 36/147 (24%)
DHC_N2 1532..1943 CDD:462462
DYN1 1759..4514 CDD:227570
AAA_6 2095..2421 CDD:463697
MT 3419..3759 CDD:463699
Dynein_C 4545..4840 CDD:465677
Dync1h1NP_084514.2 Stem. /evidence=ECO:0000250 2..1865 81/418 (19%)
DHC_N1 240..830 CDD:462457 41/176 (23%)
Interaction with DYNC1I2. /evidence=ECO:0000250 446..701
Interaction with DYNC1LI2. /evidence=ECO:0000250 649..800
DYN1 1044..4327 CDD:227570
AAA 1. /evidence=ECO:0000250 1866..2097
AAA 2. /evidence=ECO:0000250 2178..2450
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2388..2408
AAA 3. /evidence=ECO:0000250 2554..2803
AAA 4. /evidence=ECO:0000250 2897..3166
Stalk. /evidence=ECO:0000250 3187..3498
AAA 5. /evidence=ECO:0000250 3551..3780
AAA 6. /evidence=ECO:0000250 4003..4219
Dynein_C 4331..4642 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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