DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3339 and LOC110439139

DIOPT Version :9

Sequence 1:NP_001036762.2 Gene:CG3339 / 43295 FlyBaseID:FBgn0039510 Length:4842 Species:Drosophila melanogaster
Sequence 2:XP_021329571.1 Gene:LOC110439139 / 110439139 -ID:- Length:1639 Species:Danio rerio


Alignment Length:1676 Identity:540/1676 - (32%)
Similarity:888/1676 - (52%) Gaps:123/1676 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  3249 LLASGEIPELFNDDQLDTITNGIRNEVKQSGTLD-TKENCWRYFVEKVRRLLKVVLCFSPVGQTL 3312
            :|.|||:|.||..|:|..:...|..:.|::|..: .::..:::|:.:||..|.:|||.||||.:.
Zfish     1 MLNSGEVPNLFEKDELKQVLAAISPKAKEAGISEGNRDEVYQFFITRVREKLHIVLCMSPVGDSF 65

  Fly  3313 RVRARKFPAIISRTAIDWFHEWPKSALESVSQKFLNEIN-GILEPALVPPIGCF---MAYVHGTV 3373
            |.|.|.||::::...||||.:||:.||.||||.|...:. |..|..     .||   ...:|.:|
Zfish    66 RSRCRMFPSLVNCCTIDWFVQWPREALLSVSQTFFQNVEFGSEEMK-----QCFSEMCVEIHVSV 125

  Fly  3374 NQISRIYLQNEKRYNYTTPKTFLEYIFLYRKLLVDKNGEFAERIARLQSGMSKLAECARQVDTLK 3438
            ..::..:....:|:.||||.::||.|.||..:|.:|..:......|:::|::||.|....||.:|
Zfish   126 TDMAERFYSELRRHYYTTPTSYLELINLYLGMLGEKRQQLQAARDRIKNGLTKLLETNELVDKMK 190

  Fly  3439 HQLAIQEVQLAAKNAAADKLIVIVSAESEKVKRERYIASEEEKRVRIIEEDVSIKTKMCEEDLRQ 3503
            ..|:..|..||.|:.....|:..::.:.|...:.|.:..|:|...::..|:........:.||.:
Zfish   191 QDLSALEPVLAQKSIDVSALMEKLAVDQENADQVRRVVKEDEALAKVKAEETQAIADDAQRDLDE 255

  Fly  3504 AEPALVAAQAALNTLNKNNLTELKSFGSPPKAVVNVCAAVMVLLASNGKIPRDRSWKASKLMMVR 3568
            |.|||.:|..|||.|:|.:::|::.|..||..|:.|..||.:||::.      ..|.::| .::.
Zfish   256 ALPALDSANKALNALDKADISEMRVFTKPPDLVMTVMEAVCILLSNK------TDWASAK-QLLG 313

  Fly  3569 VDQFLNDLLNYNKDNIHPNIIETLQEYLKDPEFNPDKVVQKSVAAAGLCAWVINLHRYHQVFLIV 3633
            ...||..|::|:||||.|.|::.|.:|:.:|:|.|:||.:.|.|...:|.||..:..|.:|...|
Zfish   314 DGNFLKKLMDYDKDNIKPQILQKLHKYISNPDFVPEKVEKVSKACKSMCMWVRAMDLYSRVLKEV 378

  Fly  3634 GPKQQALQDSHQELLEARERLQYLKAKINNLEAKLAEIQAEFENAVGEKQRCQREADKTAFTIDL 3698
            |||::.|..:..||......|:..:.|:..:|.::..:|.:||:::.||:...:....|...:..
Zfish   379 GPKREKLAAAQVELDATMSTLKEKQNKLQEVENQIKVLQDQFESSMAEKETLAKTMALTEARLGR 443

  Fly  3699 AHRLVNGLANENVRWKESVQSLLAKIGTLPGDILLISSFLSYVGCFTRRYREEL-QHKMWLPNFR 3762
            :.:|.:.|.:|.|||:||:.....:|..:.|::.:.::.::|.|.||..||:.| .|  |:...:
Zfish   444 SGKLTSALGDEQVRWQESITLFEQEIHNVIGNVFIAAACVAYYGAFTSHYRQLLIDH--WITRCQ 506

  Fly  3763 KIDPHIPHTEGVDTLALFSDDAQIAAWNNEGLPMDRMSTENATILQYSTRWPLMIDPQLQGIKWI 3827
            .:.  ||.::....:.:..|..:|..||.||||.|.:||||..::....|||||||||.|..:||
Zfish   507 SLG--IPISDNFSLIGILGDPYEIRQWNAEGLPRDNVSTENGILVMRGRRWPLMIDPQDQANRWI 569

  Fly  3828 KNR-FGTDLVVLRLRQKGFLEALEKSISQGDTVLIEQIEESMDTVLEP-LLSRALIKKGRYL-RI 3889
            ::: ....|.|::|...|||..||.:|..|..||:|:::|::|..||| ||.:..:..||.| |:
Zfish   570 RSKETKNGLKVIKLTDAGFLRTLENAIRLGMPVLLEELKETLDPALEPILLKQTFVSGGRTLIRL 634

  Fly  3890 GDKEIEFHASFRLILHTKMANPHYKPEMQAQTTLINFTVTPDGLEEQLLAEVVKIERPDLEQMKT 3954
            ||.:|::..:||..:.||||||||.||:..:.|:||||||..|||:|:|::||::||||||:.::
Zfish   635 GDSDIDYDKNFRFYMTTKMANPHYLPEVCIKVTIINFTVTKSGLEDQILSDVVRLERPDLEEQRS 699

  Fly  3955 EVTVQQNKFKISLKALEDELLARLASSGENVLDDHALVINLENTKRTVDEIEAKVREARVTTLQI 4019
            ::.|:.|..:..|||:||.:|..|.:|..|:||:..||..|:.:|.|...|::::.||..|...|
Zfish   700 QLIVRINADRNQLKAIEDRILKLLFTSEGNILDNEELVQTLQESKVTSQAIKSRLVEAETTEEMI 764

  Fly  4020 DDTRNIYRSAAKRAAILYFVLTDLSRINPIYKFSLKSFMNVFRQAIAMAAESKNYEKRVLHLVES 4084
            :..|..||..|.|.:|:|||:..||.|:|:|:||||.|..:|...|..|.:.|:...|:..|::.
Zfish   765 NRAREKYRPVATRGSIMYFVIASLSEIDPMYQFSLKYFKQLFNNTIESAEKHKDLSLRLQILLDQ 829

  Fly  4085 ITLQTYRYTLRGLFEADKLTFTSHMTLRILIAAEQVAKDETDFLLR--------FPHDPTTLSPL 4141
            ..|..|....|||||..|..::..:.:.|::...::::.|..:.||        .|..|......
Zfish   830 TLLSAYTNVSRGLFEQHKAIYSFMLCVEIMMQRGEISQQEWLYFLRGAGGIRKELPEKPEVPWLS 894

  Fly  4142 DFVGRSAWGGIKSL-TLIEHFYGIDKDMEN--------------YTKRWRKFMASDTPEREQFP- 4190
            ||    ||....:| ..:..|.||.|::.:              ..:.|..::....|..|:.| 
Zfish   895 DF----AWETCCNLEDRLPCFNGIKKEIISTPISVKLGQLEVTVSPEHWDGYVTDLPPFSEEIPS 955

  Fly  4191 -------GEWKHRT-PLQKLCIIRSLRPDRMTYAMRQFVEQTMGRSYAEIQTPP--FGAIFQELN 4245
                   |.|..:. ..|||.:|:|...:::..|:.:||...:|:.:  ::.||  ...::.:::
Zfish   956 EKQPQVRGHWNQQLGAFQKLILIKSFMEEKVVSAVTEFVITGLGQQF--VENPPVDLTTLYADMS 1018

  Fly  4246 AATPAFFILSPGVDPIRDVERYGQRQGFHSESDTLVNISLGQGQELLAEQAIIGALESGQQWVIL 4310
            .:.|..||||.|.||:...:|:...:|:   .|.:.:|||||||..:||:.|..||::| .|:.|
Zfish  1019 PSIPLVFILSTGSDPMGAFQRFANEKGY---QDRVKSISLGQGQGPIAERMIKEALKNG-IWIFL 1079

  Fly  4311 QNIHLVVNWLPTLEKLIERIVLQSESKGESNFRLFISAEPAPDPQYHVIPQGILESSLKVVNEPP 4375
            ||.||.|:|:..:|:||:.. .:.::....:||||:|:.|.     :|.|..:|::|:||.||||
Zfish  1080 QNCHLAVSWMLAMEELIKSF-NEPDTVIHEDFRLFLSSMPT-----NVFPVTVLQNSVKVTNEPP 1138

  Fly  4376 SGMAANLHKAWDNFSQDALETCTQEAEFKSILFALCYFHAVAGERRKFGPQGWNKVYPFNIGDLT 4440
            .|:.||:.:|:...|....|......:::.|:|.:|:|||:..||:||||.|||..|.||..|..
Zfish  1139 KGLRANVRRAFTEISSTFFEEHILGRKWRKIIFGVCFFHAIIQERKKFGPLGWNIRYEFNDSDRE 1203

  Fly  4441 ISSNVLHNYLEGSNRIPWEDLRYLFGEIMYGGHITDDWDRRLCQTYLEELLQQDLIDGDFELCPG 4505
            .:...|:.|.: :..|||:.|.|:.|||.|||.:||.||:|..:|.|:.......::..:.....
Zfish  1204 CALLNLNLYCQ-TGHIPWDALTYITGEITYGGRVTDAWDQRCLRTILKSFFSLATLEEGYTYSKS 1267

  Fly  4506 --FPAPPNLDFEGYHSYITEMLPEESPLLYGLHPNAEIGFLTTASEQLLRTIFELQPRESELSSH 4568
              :.||.:.....|..||.::...:.|.::|:|.||.:.|....:..::.||.|:|||.|.... 
Zfish  1268 GIYFAPDSDSLTEYKQYIEDLPLIDDPEVFGMHENANLAFQRQETMTVINTILEVQPRSSAAGG- 1331

  Fly  4569 CGAPREELVKIMIDDFLDKLQDEFNLQALLNRVERKTP------FVVVALQECERMNALIREIKR 4627
             |...:|:|..::|..|.|:.|:.::.|.:..:..:.|      ...|..||.:|.|.|:|.:|.
Zfish  1332 -GKSNDEVVHELVDSILAKIPDKLDMDAAVESLFLQDPKGRVNSLTTVLGQEVDRFNFLLRVLKT 1395

  Fly  4628 SLRELMLGLRGELTITQEMERLDHAIFYDHVPAAWARLAYPSMLGLQSWFADLLHRIKELAGWLN 4692
            ||..|...:.|.:.:::|||::.::...:.||..|:..||||:..|.||..||..|...:..|:.
Zfish  1396 SLCTLQKAIAGLVVMSEEMEKIYNSFLNNQVPDHWSNAAYPSLKPLGSWVRDLNLRTAFIENWIT 1460

  Fly  4693 DFKLPCAIWLGGLFNPQSFLTAIMQESARKHDLPLDRMLISCD----------VTKKQKD----- 4742
            ..: |.:.|:.|.|.||.|||..:|..|||::||:|.:....:          ||:.||.     
Zfish  1461 RGQ-PKSFWISGFFFPQGFLTGSLQNHARKYNLPIDELNFRFNMVPVYRDQTLVTEAQKTLAPGK 1524

  Fly  4743 ----DVTLPPME-GAFVHDLYMDGASWDCQLNSIVALRPKEMLCAMPVIYI---KSIVQEKQELQ 4799
                |..||.:| |..||.::||...||.....:.....:.|...:||::.   ::.|.|..   
Zfish  1525 ELDMDQELPNIEDGVLVHGMFMDACRWDDTSMVVEDALSRVMNPMLPVVHFEPQQNYVPEPS--- 1586

  Fly  4800 RVYECPLYKTRSRGNT---------YVWTFNLKTRERPSRWILGGVALLLQ 4841
             :|..|||||.:|..|         :|.|..|.:.:....||....|||.|
Zfish  1587 -LYHAPLYKTSARAGTLSTTGHSTNFVVTVMLPSNQPSDYWISKASALLCQ 1636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3339NP_001036762.2 DHC_N1 276..903 CDD:285571
DHC_N2 1535..1944 CDD:285579
P-loop_NTPase 2095..2324 CDD:304359
P-loop_NTPase 2409..2544 CDD:304359
P-loop_NTPase 2731..3061 CDD:304359
P-loop_NTPase 3138..3406 CDD:304359 57/161 (35%)
MT 3419..3759 CDD:289543 102/340 (30%)
AAA_9 3789..4001 CDD:289547 99/214 (46%)
Dynein_heavy 4142..4832 CDD:281078 225/755 (30%)
LOC110439139XP_021329571.1 MT <1..1254 CDD:330758 431/1285 (34%)
AAA_9 530..747 CDD:315453 99/216 (46%)
Dynein_heavy 892..1634 CDD:308587 228/765 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1492at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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