DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3339 and LOC100488188

DIOPT Version :10

Sequence 1:NP_001036762.2 Gene:CG3339 / 43295 FlyBaseID:FBgn0039510 Length:4842 Species:Drosophila melanogaster
Sequence 2:XP_031752833.1 Gene:LOC100488188 / 100488188 XenbaseID:XB-GENE-29079095 Length:5275 Species:Xenopus tropicalis


Alignment Length:71 Identity:17/71 - (23%)
Similarity:27/71 - (38%) Gaps:17/71 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 YHHHHPHLATGGYRMEESYDVPRPLLSQQQHL-TPSSSNSSLLTSDSFSLSS---------SNRS 279
            ||.|.|    ..:..||.::   .||.:.|.| ..:..|...|..::..:|.         .:.|
 Frog   139 YHRHCP----AEWAAEEHWE---KLLKKMQSLWEKACENQRNLNVETTRISHWKAFGDILYRSES 196

  Fly   280 SLANMP 285
            .|.:||
 Frog   197 VLLHMP 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3339NP_001036762.2 DHC_N1 279..903 CDD:462457 4/7 (57%)
DHC_N2 1532..1943 CDD:462462
DYN1 1759..4514 CDD:227570
AAA_6 2095..2421 CDD:463697
MT 3419..3759 CDD:463699
Dynein_C 4545..4840 CDD:465677
LOC100488188XP_031752833.1 DHC_N1 180..809 CDD:462457 5/23 (22%)
DHC_N2 1339..1819 CDD:462462
AAA_6 2047..2442 CDD:463697
Dynein_AAA_lid 2598..2724 CDD:465532
AAA_7 2739..2909 CDD:463698
AAA_lid_1 2956..3044 CDD:465535
AAA_8 3127..3366 CDD:463701
MT 3415..3744 CDD:463699
AAA_9 3859..4047 CDD:463702
Dynein_C 4767..5049 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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