DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hmu and AT5G14580

DIOPT Version :10

Sequence 1:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_196962.1 Gene:AT5G14580 / 831309 AraportID:AT5G14580 Length:991 Species:Arabidopsis thaliana


Alignment Length:588 Identity:122/588 - (20%)
Similarity:191/588 - (32%) Gaps:133/588 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 IHGGEVIKLTSNHVTHVTKIGQPCEDIYEESRCGRP-----LGLAFDTQGNNLIIADAYYGLWQV 143
            :||..:.......|.....:|.|.|....:|..|.|     |..:|.....|.:.........:|
plant   386 LHGSALFSRGDTQVLCTVTLGAPAEAQSLDSLVGPPKKRFMLHYSFPPYCTNEVGKRGGLNRREV 450

  Fly   144 DLGT--NKKTLLVSPAQELAGKSINRPAKIFNGVTVSKEGDVYWTDSSS----DFTIEDLVFASF 202
            ..||  .|..|.|.|.:|....:|.     .|...:|.:|.   |..:|    ...:.|......
plant   451 GHGTLAEKALLAVLPPEEAFPYTIR-----INSEVMSSDGS---TSMASVCGGSMALMDAGIPLR 507

  Fly   203 ANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVVAE-------TGAMRLTKYHLKGAK 260
            |:.:|          ||..|:.::..::|    ..:|:.:|.:       .|.|   .:.:.|.:
plant   508 AHVAG----------VSVGLITDVDPSSG----EIKDYRIVTDILGLEDHLGDM---DFKIAGTR 555

  Fly   261 AGQSEVFVDGLP-GLP-DNLTPDAEGIWVPLVQSADS-----EHPNG---------FTLFTRFPS 309
            .|.:.:.:|..| |:| |.:....|......:|..|.     ..|.|         .||.....|
plant   556 DGVTAIQLDIKPAGIPLDIVCESLENAREARLQILDHMERNINSPRGQDGAYSPRLATLKYSNDS 620

  Fly   310 VRLFLARMLAL-----------FELPFRYLNSVYPN----KFSQRFVHF-------VGHMESITV 352
            :|..:..|..|           ..:....|..|..|    :.:|..|.|       ||.:...||
plant   621 LRTLIGPMGVLKRKIEVETGARLSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVYKGTV 685

  Fly   353 LAPKRTTVVRVDWNGNIVGSLHGFDKSAATVSHVLEFQDFLFLGS-----------PTNQYLAR- 405
            .:.|..... |::.|...|.||..:.|...||.|   .|.|.:|.           ..|..|:| 
plant   686 SSIKEYGAF-VEFPGGQQGLLHMSELSHEPVSKV---SDVLDIGQCITTMCIETDVRGNIKLSRK 746

  Fly   406 --VKSPK-------AKQPTLKVRN-VRVEGEGLEASIGVPPSKATPKPKAAPSTTTPKPTTTTTT 460
              :..||       .|.|.:|..: |.:|...:...:...||..||..|:..|.    |.....|
plant   747 ALLPKPKRKPASDAGKDPVMKESSTVYIENSSVGEIVASMPSIVTPLQKSRLSV----PAVVIRT 807

  Fly   461 TTP-KPTTKTTTTTTTPKPTTTTTTK---KPTTTTTTTTTTPKPTTTKPPTAKPSTTT------- 514
            ... ....|::......||....|:|   ||.:|.:....|.|........|...|:.       
plant   808 AVECNEAEKSSPVNDNDKPRRAATSKPDRKPKSTASKLIATQKEEEALESIAPEETSAECGEILK 872

  Fly   515 ----TTTTTPKPTTTTTPTTPTPEPSKPKVKRTVPEKPAPVEEDIPSDTQPPKKEKLKVINKQGV 575
                ..:.:||..:|.:......:..|..:|..:.|..|  ||.....|:     |||:..:...
plant   873 QDGKLKSVSPKNNSTASNLVSFSKAKKSTMKENLSENKA--EESASVSTR-----KLKIGTEMTA 930

  Fly   576 NVE 578
            .|:
plant   931 TVD 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmuNP_477159.1 YvrE 61..>287 CDD:442613 45/222 (20%)
AT5G14580NP_196962.1 Pnp 54..747 CDD:440798 81/389 (21%)
PRK12269 <677..873 CDD:105491 47/203 (23%)

Return to query results.
Submit another query.